Gene VEA_001066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001066 
Symbol 
ID8559379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1208661 
End bp1209872 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content49% 
IMG OID646408737 
Productvibrioferrin ligase/carboxylase protein PvsA 
Protein accessionYP_003288216 
Protein GI262396363 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA CGATGATTAT CGTAAGTCAT GTCGTTAACG ATGCAGTCAC TCACGGCTTC 
GTGCCTGCAG CTAAAGCGAT GGACCTTCAC GTCGTTCTTA TCACCGACCA CAAGATCAGC
CATTTAGAGC TGGCGAGTCG TGATAGTCAC TTTAATCCGG ATACCATTCT AGAATGTGAT
GTCTTCAACC CATTAGAACT CATCGAAACC ATCACGGAGC ATGAATTAAA GCCAGACGCT
ATTTTCAGCA ATAGTGATCA CTTACAAACT TCCACCGCCA TCTGCGCGCA ATTTTTTGGC
CTCCCATCCA AAGATTGGTC TGTCACGTTA AAAGCCAAAA ACAAACACTT AACTCGACAA
GTGTTAAATG AAAAAGCCCT ACCCAACACA CAAAGCTGTT TGCTGCACCG CCATTCGAAT
ATGGCATTAG GCATGGCCTT TCCTGTCGTA GCAAAACCCA AAGAAGGCGT GGCAAGTTTA
GATGTGCAGC GCTGTGACTC CCAAAGCGAG CTCGACGCAT ACTGCGATGC GTTTTGGCAA
AAACACCCAA ACGCCGCCAT TCTGGTGGAG CATTTCCTTC AAGGACCGTT GGTTACGCTC
GAAACTCTGG GAGATGGTGA GCGCCTTATC GCCGTGGGCG GCTTTGATGT GTCGCTCTCA
GAGCCGCCTT ACTTTATCGA AACGGCCGCA GACTGGAACG GACCAAACGG CATTGCTCAC
CGAGAAGCTT GCGTGGCTCA ACTGAAAGCG TTTGGCGTTG GTTTTGGTGT TTGCCACAGC
GAATTTATTA TCACTGAAAA CGGCCCAGTC CTAGTGGAAA TTAACTACCG CAGCATTGGA
GATGGTCGCG AATTCTTGCT CAACAATCTC GCTCACTTCG GTTGGTTTAG CACGATTTTA
GGTCTGCATT TAGGCCGAAG ATTGGACGGC GATTACCAAA TTCATGGTTC AGCGCACGTG
CACTACGTGG TTGCCGAACA CAGTGGTGTG ATTGATGGAG ATTCGACGTC GTTCATCCAA
CACGATGACG ATATCATCAC CCAGCAACAG GTACTAAAAA CCGCTGGAGA ACACTTCCAA
CAGAGTTATT CCAATAAGGA TTATCTCGCC CGAATTTCGA TTGTCTCACC ATCAGGGCGA
AACCTCGACC AAGCGCTGCA GAACGCGCTT AGCAATTTCG ATCTAGCTCC GACTCGTGAG
GTGGCAGCAT GA
 
Protein sequence
MKSTMIIVSH VVNDAVTHGF VPAAKAMDLH VVLITDHKIS HLELASRDSH FNPDTILECD 
VFNPLELIET ITEHELKPDA IFSNSDHLQT STAICAQFFG LPSKDWSVTL KAKNKHLTRQ
VLNEKALPNT QSCLLHRHSN MALGMAFPVV AKPKEGVASL DVQRCDSQSE LDAYCDAFWQ
KHPNAAILVE HFLQGPLVTL ETLGDGERLI AVGGFDVSLS EPPYFIETAA DWNGPNGIAH
REACVAQLKA FGVGFGVCHS EFIITENGPV LVEINYRSIG DGREFLLNNL AHFGWFSTIL
GLHLGRRLDG DYQIHGSAHV HYVVAEHSGV IDGDSTSFIQ HDDDIITQQQ VLKTAGEHFQ
QSYSNKDYLA RISIVSPSGR NLDQALQNAL SNFDLAPTRE VAA