Gene VEA_001050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001050 
Symbol 
ID8559363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1188742 
End bp1189407 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID646408721 
ProductABC transporter ATP-binding protein 
Protein accessionYP_003288200 
Protein GI262396347 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.135048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGAAG GGGTCGACTT CACGTTGAAC ACAGGAGCGA GTGTTGCACT GACGGGCGCA 
AGTGGTAGCG GCAAAAGTAC TTTACTCAAT ATCATCGCTG GCTTTGAGCC ACTTTCCGGT 
GGTGAGTTGT GGCTAGACGG CGACAACGCA GCGGCTTGGA AAGACCCACA ATGGAGCCGA 
TTTCGCCATC AAAAACTCGG TGTTATCTTC CAGCAATTCA ACCTGTTAAC GCCGCTCAAC 
GTGCAGCAAA ACATCGCCTT CCCTCTGCAT TTGAATCAGC AGAAATGGAA CGACTGGTGC 
GATTACTTGG TCGAGACTTT AGGGATCTGC CAACTTCTCG ACAGACATGT TTCTGCCCTT 
TCCGGTGGTC AACAGCAACG AGTCGCTATC GCACGCGCAT TGGCACACAA ACCCAAACTT 
CTGCTTGCCG ATGAACCCAC AGGCAACCTA GACCAAAAAG CTGGCTTGGA AGTGATGAAA 
CTGTTGAATG AAATCACCAC CCAAGGCAAT ACCGCCGTGC TCTTGGTGAC CCACAGCCCT 
GAGTGTGCCG AGTTCATGCA AACCCAATTA CGTTTAAAAG ATGGGCGTTT GAAGGATGGT 
CGTTTGCAAA ACGGACTGAC GCAAAATCAG CGCGATGTAA ATGAGCAACA TCATGAAGCA 
AGCTAG
 
Protein sequence
MLEGVDFTLN TGASVALTGA SGSGKSTLLN IIAGFEPLSG GELWLDGDNA AAWKDPQWSR 
FRHQKLGVIF QQFNLLTPLN VQQNIAFPLH LNQQKWNDWC DYLVETLGIC QLLDRHVSAL 
SGGQQQRVAI ARALAHKPKL LLADEPTGNL DQKAGLEVMK LLNEITTQGN TAVLLVTHSP 
ECAEFMQTQL RLKDGRLKDG RLQNGLTQNQ RDVNEQHHEA S