Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001030 |
Symbol | |
ID | 8559343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1170274 |
End bp | 1170720 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646408701 |
Product | RmlC-type cupin |
Protein accession | YP_003288180 |
Protein GI | 262396327 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACA AAAGCAATAC TCAAATCCCT GACGTACTGC AAGCCGGTGT ATTTCAAGGT CGAGGCATTT TCGAGTTTGG TGAAAAGAAT GAAGCGTATG CGGATTACTT TACCGGTACG AGTTATCTGG CGTTGCTCAA TCAGCCTGGT CTTATCGTGG CGAACGTAAC GTTTGAACCA GGTTGTCGCA ATTTTTGGCA TATTCATCAT GAAGGTGGGC AGATTCTGTT AGCGACAGGA GGGCGAGGTT GGTATCAAGA ATTTGGCCAA CCAGCAAAAG AGTTGAATGT TGGCGATGTC GTGCATATCG CGCCAGGTAC TAAGCATTGG CATGGCGCAG CTAAAGACAG TTGGTTCTCA CATGTAGCAA TAGAAATACC GGCTGAAGGC GCAAGTAATG AATGGTGCGA ACCAGTCTCT GATCAAGAGT ACATGCAACT AAAGTAG
|
Protein sequence | MNNKSNTQIP DVLQAGVFQG RGIFEFGEKN EAYADYFTGT SYLALLNQPG LIVANVTFEP GCRNFWHIHH EGGQILLATG GRGWYQEFGQ PAKELNVGDV VHIAPGTKHW HGAAKDSWFS HVAIEIPAEG ASNEWCEPVS DQEYMQLK
|
| |