Gene VEA_001030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001030 
Symbol 
ID8559343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1170274 
End bp1170720 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content46% 
IMG OID646408701 
ProductRmlC-type cupin 
Protein accessionYP_003288180 
Protein GI262396327 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACA AAAGCAATAC TCAAATCCCT GACGTACTGC AAGCCGGTGT ATTTCAAGGT 
CGAGGCATTT TCGAGTTTGG TGAAAAGAAT GAAGCGTATG CGGATTACTT TACCGGTACG
AGTTATCTGG CGTTGCTCAA TCAGCCTGGT CTTATCGTGG CGAACGTAAC GTTTGAACCA
GGTTGTCGCA ATTTTTGGCA TATTCATCAT GAAGGTGGGC AGATTCTGTT AGCGACAGGA
GGGCGAGGTT GGTATCAAGA ATTTGGCCAA CCAGCAAAAG AGTTGAATGT TGGCGATGTC
GTGCATATCG CGCCAGGTAC TAAGCATTGG CATGGCGCAG CTAAAGACAG TTGGTTCTCA
CATGTAGCAA TAGAAATACC GGCTGAAGGC GCAAGTAATG AATGGTGCGA ACCAGTCTCT
GATCAAGAGT ACATGCAACT AAAGTAG
 
Protein sequence
MNNKSNTQIP DVLQAGVFQG RGIFEFGEKN EAYADYFTGT SYLALLNQPG LIVANVTFEP 
GCRNFWHIHH EGGQILLATG GRGWYQEFGQ PAKELNVGDV VHIAPGTKHW HGAAKDSWFS
HVAIEIPAEG ASNEWCEPVS DQEYMQLK