| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001016 |
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| Symbol | |
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| ID | 8559329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1154309 |
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| End bp | 1155121 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646408687 |
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| Product | transcriptional regulator AraC/XylS family |
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| Protein accession | YP_003288166 |
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| Protein GI | 262396313 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0540486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATT CAGATAACCC CAAAGCCCCG CCATATCAAG AGATTATGCT GCCTAAGCCA
GCAGAACTGA TCACACTTCC GTCTTATATG GACTGCCATG ATCATTCTTA CACACAGATC
GTGATTGGTT TAAAAGGACA AGCCGAATTT GAAGTGCGTG GACGAGGTAA TCTTGTCGGT
CCTGGCCAAG GTTGTGTGGT AACCGCATGC TCTGATCATG CTTTCGGTGG CGTCATTAAT
CAATCGGATA TTTTGGTGCT GAATATGCCA AAACCGACAA ATGATGATCC TGAAATGCTG
CAGAAAATCA ATAATCTAGA AAGAGACCAT GTCTACTTTC AGTTAGACGG TCAAATTCAG
AAGCTGATAC AGATGTTGGT TCAGGAAATG CGAAACCATC CGGATGATCT GCTGTTAAGT
CGTGCGTGCA ACGACACTGT GATTGCACTG ATGCAGCGCC ATATCTCGGC ATTTGAGACT
AGCCGAAAAG AGTCACGCTT TGATTTGGAG GCGATTGATC GCTACATCGA GCAGCACCTT
AGCCATAAGA TCAGTGTGGC TCAGTTAGCG GGACGAGTGT TTCTTGGGGA AAGTCAGTTC
CATTGCTTGT TTAAGGAGCA GATGGGGATT ACACCTCATC AATATGTTCT CGGAAAGCGT
ATCGACATGG CTCGTGAATT AATCGAGCAA GGCCACCTTT CTTTAGGGCA AATTGCCGAA
TTCACTGGTT TCTCAAGCCA GAGTACGTTT ACTCATACTT TTACTCGCTT ACAGGGAATA
TCGCCATCCC GTTATAAAAA ACAAGTTGGA TAA
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| Protein sequence | MSDSDNPKAP PYQEIMLPKP AELITLPSYM DCHDHSYTQI VIGLKGQAEF EVRGRGNLVG
PGQGCVVTAC SDHAFGGVIN QSDILVLNMP KPTNDDPEML QKINNLERDH VYFQLDGQIQ
KLIQMLVQEM RNHPDDLLLS RACNDTVIAL MQRHISAFET SRKESRFDLE AIDRYIEQHL
SHKISVAQLA GRVFLGESQF HCLFKEQMGI TPHQYVLGKR IDMARELIEQ GHLSLGQIAE
FTGFSSQSTF THTFTRLQGI SPSRYKKQVG
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