Gene VEA_001010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001010 
Symbol 
ID8559323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1146336 
End bp1147019 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content43% 
IMG OID646408681 
Producthypothetical protein 
Protein accessionYP_003288160 
Protein GI262396307 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCCA ATTTGAAGCG TAAAGTTACA TTATTAATCA GTTTAAGTTG TTTTTCGTTC 
CAAATTGGTG CGTTAAGCAG TAAAGAACAA CAATGGGTCA ATACGGTCAC AGCGGTGTAC 
GGCGAACGTG CGGGATTGCG CGTAAATACA TGGCGAAAAA ACCTCGACTT ATTTAAACAA 
TTAGAGACAC ATGAACAGCT CGCTGGCGTC AACGACTTTT TTAACCAGCT GTATTTTGTT 
GACGACATAA AACTGTGGGG AAAGACAGAT TATTGGGCTA CGCCACTCGA ATTTTTAGGG 
AGTAATGCAG GGGATTGTGA GGATTTCACC ATCGCCAAGT ACTTCTCGTT ACTCGAGCTA 
GGAATACCAG ATTCTAAGAT GCGTTTGATC TACGTAAAAG CCATCGAACT GAATCAGTTT 
CACATGGTAT TAGCTTACTA CCCAACCCCA AGCTCTGAGC CGCTCATTCT CGACAATATC 
AACCCTGATA TTGTCCGAGC CTCTAAACGT AGCGACTTGC TACCGATATA CAGTTTTAAT 
GGTACAAACC TGTGGTTGAT GAAGTCTTCT GCTAGCACTG GAGAGCTGGC AGGGAAAGCA 
TCACGGTTGA GCCTTTGGAA TGACTTACGC TCGCGCGAAC GTAAGTTGCA GTTAAATAAA 
CCTAAAATTA ACTATGACGA GTGA
 
Protein sequence
MRSNLKRKVT LLISLSCFSF QIGALSSKEQ QWVNTVTAVY GERAGLRVNT WRKNLDLFKQ 
LETHEQLAGV NDFFNQLYFV DDIKLWGKTD YWATPLEFLG SNAGDCEDFT IAKYFSLLEL 
GIPDSKMRLI YVKAIELNQF HMVLAYYPTP SSEPLILDNI NPDIVRASKR SDLLPIYSFN 
GTNLWLMKSS ASTGELAGKA SRLSLWNDLR SRERKLQLNK PKINYDE