| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000999 |
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| Symbol | |
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| ID | 8559312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1132488 |
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| End bp | 1133543 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408670 |
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| Product | outer membrane protein C precursor |
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| Protein accession | YP_003288149 |
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| Protein GI | 262396296 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.226351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC ACATTTTGAC TCTACTTCTC CCAACATTGA TGGCATCAAA CGCAATGGCA
GCGCAGCTGT ATCAAGCGGA AGATGGGTCA GTTTTAAATA TTTACTCTCG TCTTGGTTTC
AATGTCACCA GTAAAAATGA TGAGCACGGC GATGCAAATG GCGAGTTTGA TGGCCGTATT
GGTTTAAACG GTTCACAAAC TATCAACGAG TACGCGTCGA TCATCGGCCA AGCGCAATAC
CAAGTGGGTG CCGCTGAATA CGCAAACCAA GTAAACGACA AACCGTCTCT GACCGCACGT
TATGTATGGG CGGGTATTGA TGCGAAAGAT TATGGTCGCA TTACTGGTGG TCGCGTGGCT
TCTGGGTTGA TTATGTTTAC CGACATTGGT GATGTGTTCG CCTCTTCCGA TGTTTCTATG
GCGCGCCAAG CGAATAAAGT CGACAAAACC GCGACGCAAG TTTTCCGTCA AGATGGCACG
CTGCAATACC AAAACAGCCT AGGTAATTTC GACTTTTCTG TCGCGTACAT TTTAGGAAAC
AACACTTCTG AGCTTGACTA CGGTTACAAC GCTGCACTGC GTTATACGCT AGACATGGGG
AATTTGGGTA CCTTGGCACC AGTGGTGGCG ATGCAGAAAA ATAAAGGTGA TGCACGTGAA
AGCAACGACA CCGATTACAC ATTCTGGGGC GCAGGTACAC GTTACTACCT AGGAGATTTG
ATGTTGGGTG CGTTGTACTC GGAAGATGAA CTAGAGGGTT ATTACTCACA AACTAGTACC
GACAAAGTGA TGGAACTGAC GGCGGTTTAC AGTGTAAATG ACAAATGGGC ACTGCGTGCT
GGTTATCGTT CTTTAGAAAA CAGTGATGGT GACGAGCTAG AGCTGAAAGA TACAACGCTA
GAAGTGCAAT ACAAACTGAC GCCTCGTTCT TCTATCTACA CAAACTACGT TGATCGTAAC
GGCTCGCGTG GCTACAGCAA TGGACAAGAA GTCTCGTTTG GCGGTGCGCA CGCAGACGAA
AGCTACTACC ACTTAGGTCT GCGTTACGAG CTGTAA
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| Protein sequence | MKKHILTLLL PTLMASNAMA AQLYQAEDGS VLNIYSRLGF NVTSKNDEHG DANGEFDGRI
GLNGSQTINE YASIIGQAQY QVGAAEYANQ VNDKPSLTAR YVWAGIDAKD YGRITGGRVA
SGLIMFTDIG DVFASSDVSM ARQANKVDKT ATQVFRQDGT LQYQNSLGNF DFSVAYILGN
NTSELDYGYN AALRYTLDMG NLGTLAPVVA MQKNKGDARE SNDTDYTFWG AGTRYYLGDL
MLGALYSEDE LEGYYSQTST DKVMELTAVY SVNDKWALRA GYRSLENSDG DELELKDTTL
EVQYKLTPRS SIYTNYVDRN GSRGYSNGQE VSFGGAHADE SYYHLGLRYE L
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