Gene VEA_000920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000920 
Symbol 
ID8559233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1053671 
End bp1054306 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID646408591 
Productribose 5-phosphate isomerase 
Protein accessionYP_003288070 
Protein GI262396217 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CACTAATGAT GGAAAACAGC CAAGCAGCGA AAAACGCAAT GGTGGCTGGC 
GAGCTTAACT CTGTAGCAGG TGGCCTTGGT CACGATGTTT TCAATGTTGG TATGACGGAT 
GAAAACGACC ATCACCTAAC TTACATTCAC CTAGGTATCA TGGCGAGCAT TCTGCTGAAC 
TCAAAAGCTG TGGACTTCGT GGTAACTGGT TGTGGTACTG GCCAAGGTGC ATTGATGTCT 
TGCAACCTAC ACCCTGGCGT TGTTTGTGGT TACTGCCTAG AGCCATCAGA CGCGTTCCTG 
TTCAATCAAA TCAATAACGG CAACGCGATT TCTCTAGCAT TTGCTAAAGG TTTTGGTTGG 
GCGGGTGAAT TGAACGTTCG TTACATCTTC GAAAAAGCGT TCACAGGCAA ACGCGGCGAA 
GGTTACCCAA TTGAGCGTGC AGCACCTCAG CAAGCGAACG CGGCTATCCT AAACAACGTG 
AAATCAGCGG TAGCAAAAGA CGTGGTTGAA GGTCTACGTG CTATCGACCA AGAGCTAGTG 
AAAACTGCAG TAGGCAGCAC GCAATTCCAA GAGTGTTTCT TTGCGCACTG CCAAGTACCT 
GAAATTACAG AATATGTGAA GTCGCTACTA GACTAA
 
Protein sequence
MKIALMMENS QAAKNAMVAG ELNSVAGGLG HDVFNVGMTD ENDHHLTYIH LGIMASILLN 
SKAVDFVVTG CGTGQGALMS CNLHPGVVCG YCLEPSDAFL FNQINNGNAI SLAFAKGFGW 
AGELNVRYIF EKAFTGKRGE GYPIERAAPQ QANAAILNNV KSAVAKDVVE GLRAIDQELV 
KTAVGSTQFQ ECFFAHCQVP EITEYVKSLL D