Gene VEA_000915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000915 
Symbol 
ID8559228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1048289 
End bp1048966 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID646408587 
Producthypothetical protein 
Protein accessionYP_003288066 
Protein GI262396213 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA GATACCTTAC TTCTGCACTC TTACTTGCAA TGACTTCTGG TTTAGCGGCT 
GCCGCATCGG TGGATATTCG TCATGAATAT GTGCCTGATC GTGATGGTGA CGAACATCGA 
GATCGTATTT ACGTTTCTCA CCGTTTCGAC AACCAAATCG GTTTTAGCGT GGAAGCAAAA 
TGGAACTACA AAGATGGTCA CATGGGCAAT GCAGGCCATG AAACTGGCGT GAGCTACCGT 
TGGAAAGCGA CCGACAATTT CTCTCTAACG CCGGGCATTA ACATTGATGC CAGCCCATCG 
GGTGCGTCAG TGTTCAAGTA CAACTTGACG GGCGCGTACA AAATCAATGA CGAGTGGGAT 
GTCGCTGCGC GTATTCGTCA TGGGTACAAA AACACGGACG ACTCGCGCTA CAACCAGCTC 
AACCTTTACG CAAACCGTAA GTTTGAATGG GGCAAGCTTG GCGTAGAAGC GGAGTACAAA 
GATATTCATG GCGGTGAAGG TGGCTGGAAA GACAAAGGTC ATGATCAGCT GATCGACTTT 
AAAGGCGAAT ACACCAAGTT AGAAAGTGGT GTGATTCCAT TCTTCGCTAT CGCGGCGATC 
ACGCACAAGG GTGACGGCTC AGAGTTTAAA GATGAATATG TTCCTCGTTT CCGTGTCGGT 
TTGAAATACA ACTTCTAA
 
Protein sequence
MKVRYLTSAL LLAMTSGLAA AASVDIRHEY VPDRDGDEHR DRIYVSHRFD NQIGFSVEAK 
WNYKDGHMGN AGHETGVSYR WKATDNFSLT PGINIDASPS GASVFKYNLT GAYKINDEWD 
VAARIRHGYK NTDDSRYNQL NLYANRKFEW GKLGVEAEYK DIHGGEGGWK DKGHDQLIDF 
KGEYTKLESG VIPFFAIAAI THKGDGSEFK DEYVPRFRVG LKYNF