| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000912 |
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| Symbol | |
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| ID | 8559225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1042758 |
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| End bp | 1043915 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408584 |
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| Product | oligogalacturonate lyase |
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| Protein accession | YP_003288063 |
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| Protein GI | 262396210 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAG GTGATGTGAT TACTCTCAAC TTCGAAACGT TTGTTGATAG TGATACCCAA
GTGAAAGTGA CGCGATTAAC GCCAACGGAC GTGATTTGTC ACCGTAACTA CTTTTACCAG
AAGTGCTTTA CTCAGGATGG AAAAAAGCTG CTGTTTGCAG GTGATTTCGA CGGAAATCGC
AACTATTACC TGCTTAACCT TGAAACGCAA CAAGCAGTCC AACTGACGGA AGGTAAAGGT
GACAACACCT TTGGCGGTTT CATTTCGACG GATGAGCGTG CATTTTTCTA CGTGAAAAAC
GAACTGAATT TGATGAAAGT CGATTTAGAG ACGCTGGAAG AACAAGTCAT TTATACGGTC
GATGAAGAGT GGAAAGGCTA CGGTACTTGG GTGGCAAATT CTGACTGTAC CAAGTTAGTC
GGCATCGAGA TTCTAAAACG TGATTGGCAA CCGCTGACAT CGTGGGAAAA GTTTGCCGAG
TTCTACCACA CCAATCCAAC TTGTCGCCTA ATTAAAGTGG ATATCGAAAC CGGTGAGCTG
GAGGTGATCC ATCAAGACAC TGCGTGGCTA GGTCACCCAA TTTACCGTCC GTTTGATGAC
TCAATGGTTG GTTTCTGTCA TGAAGGTCCG CATGATTTGG TGGATGCGCG CATGTGGCTG
GTCAATGAAG ATGGCAGCAA CGTTCGTAAA ATCAAAGAGC ACGCAGAAGG TGAATCGTGC
ACGCACGAGT TCTGGATTCC AGATGGCAGC GCAATGGCGT ACGTTTCTTA CTTCAAAGGT
CAAACTGATC GCGTGATTTA CAAAGCCAAC CCAGAGACAT TAGAGAATGA AGAAGTGATG
GTGATGCCAC CTTGTTCTCA CCTTATGAGT AACTTCGATG GTTCTTTGAT GGTTGGTGAT
GGTTGCGATG CGCCAGTTGA TGTTGCAGAC GCGGACAGCT ACAACATCGA AAATGACCCG
TTCTTGTATG TATTGAACAC AAAAGCGAAA TCGGCGCAAA AACTGTGTAA GCACAGCACA
TCTTGGGATG TGTTGGATGG CGATCGCCAA ATTACTCACC CGCATCCGTC ATTCACACCG
AACGATGATG GTGTGTTGTT TACCAGTGAC TTTGAAGGCG TTCCTGCGAT TTACATTGCG
GACGTGCCGG AGTCTTAG
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| Protein sequence | MAKGDVITLN FETFVDSDTQ VKVTRLTPTD VICHRNYFYQ KCFTQDGKKL LFAGDFDGNR
NYYLLNLETQ QAVQLTEGKG DNTFGGFIST DERAFFYVKN ELNLMKVDLE TLEEQVIYTV
DEEWKGYGTW VANSDCTKLV GIEILKRDWQ PLTSWEKFAE FYHTNPTCRL IKVDIETGEL
EVIHQDTAWL GHPIYRPFDD SMVGFCHEGP HDLVDARMWL VNEDGSNVRK IKEHAEGESC
THEFWIPDGS AMAYVSYFKG QTDRVIYKAN PETLENEEVM VMPPCSHLMS NFDGSLMVGD
GCDAPVDVAD ADSYNIENDP FLYVLNTKAK SAQKLCKHST SWDVLDGDRQ ITHPHPSFTP
NDDGVLFTSD FEGVPAIYIA DVPES
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