| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000887 |
|---|
| Symbol | |
|---|
| ID | 8559200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1016715 |
|---|
| End bp | 1018562 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408559 |
|---|
| Product | oligoendopeptidase F |
|---|
| Protein accession | YP_003288038 |
|---|
| Protein GI | 262396185 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.202971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAA CGGATTATCT CAACGACCTC AATCAACGTT ACCTCGCGAT TCACCGCACC
AAAGAAGATT TCTTTTGGGA AACTTACATG GGGATCAGCG ATGACCATGA TGGCTCGACG
CAAGCACAAA CCGCATGGAC AAGCTTTTTA AGCAACGCCG AGCAAATTAC TGCCATCAAA
CAACAGCTTG AAGCCGCGGA CTCAATTACC GACCCACAAG AGAAACAGCA AACCATTACG
GGTCTTTCTG GTTGGCTGGC GATGTTTGAA TCTCACGCAA TCGAGGGCGA AAAGGCACAA
GCGTTGAAAA ATCAGCTCAT TGCCTTTGAA GCTGAGCTAT TCGAGAAAAA ACAGAACCAC
GTACAAACGT TTACCGATGA AAACGGCGAG CAAGTGGAAG GTTCACTGCC AGTATTGAGC
TCAACCATTC GCACCAACAA TCATGAAGAA GTTCGCCAAT CGGCTCATCA AGCGTTGCTG
AACCTTGAAC AATGGCTACT GCAAAACGGC TTTATAGAAC TGATCAAACT GCGCAACCAG
TTCGCACGCT CACTTGGTTA TACGACCTTC TTTGATTACT CCGTGCAAAA AACGGAAAAG
ATGAGCTCTG AGCAACTATT CGAGATTTTG GAAGATTTCG AACAACGCAC GCGAGATGCG
CACCTAAACA GCTTAGAAAA CTTGGCGAAA GAGAAAGGTG CAAGCGCACT CACTGGCTTC
AACTTTGTTT ACTCGTTCGC GGGTGACGTC ATGCGTGACC TTGACCCATA CGTGCCGTTC
TCTAAATCTC TGAGACGCTG GGTAGAATCG TTTGGTCGTC TGAATATTGA TTACTCTGGC
GCGACGCTAA CGCTGGATTT GTTAGACCGC AAAGGTAAGT ACCCGAACGG GTTCTGCCAC
GGCCCTATCC CTTCATTCTA CAATCAAGGC GAATGGGTCG CAGCACAGGT GAACTTCACC
AGCAATGCCA AACCAGACCA AGTGGGCAGC GGCTACGATG GCATTAACAC GCTGTTCCAC
GAAGGTGGCC ACGCAGCACA CTTTGCGAAC GTAAAAATGA ACGCGCCTTG TTTCTCGCAG
GAGTTTGCGC CGACTTCAAT GGCTTATGCA GAAACTCAGT CGATGTTCTG TGACAGCCTG
TTAACCGATG CCGATTGGCT AAAACAATAC GCACTGGATG ATGAAGGGAA TCCGGTTCCT
GATGAGATCA TTCAAGCGAT GATCAACAGT CGTCAGCCAT TCAAAGCTTA TGAAGAACGT
AGCATCTTGG TTGTGCCGTA CTTTGAACGC GCGTTATATC AACTTAGCGA TGACGAGTTA
ACGCCAGAGC GCATCACTAA GCTGGCTCGC GATTGTGAAA AACAGATCCT TGGTTTGGAA
TGCAGCCCTC GCCCACTGAT GGCGATTCCA CATTTGCTAT CCGACGAAGC GGCTTGTGCG
TATCAAGGTT ATCTACTCGC GCACATGGCG GTGTATCAGA CCCGCGCATA CTTCCTTGAG
AAGTTTGGCT ATCTGACGGA TAACCCAGAA ATTGGCCCAC TGCTGGCAAA ACACTACTGG
CATGCAGGCA ATCATTTGTC GCACAACGAA ACCATTTTCA GCCTGACTGG CGAGGGGTTC
AATGCTAAGT ACTTGGCAGA TGTATGTAAT CTATCGCCAG AGCAAGCGTG GGAAGTACAG
CAGAAGAAAA TCGACTCACT TGCAACACGA GAACGAGCAC CAGTTGCTTC ACTGAACGCG
ACAATTAAAG TCGTCGACGG CAGTAAAGAA CTGGCAAGCA ACGTCATCTC TGACGAACAA
ATGTGTGACG ATTTTGAACG TTACATCGTA GAGACTTACG GTCGATAA
|
|---|
| Protein sequence | MTATDYLNDL NQRYLAIHRT KEDFFWETYM GISDDHDGST QAQTAWTSFL SNAEQITAIK
QQLEAADSIT DPQEKQQTIT GLSGWLAMFE SHAIEGEKAQ ALKNQLIAFE AELFEKKQNH
VQTFTDENGE QVEGSLPVLS STIRTNNHEE VRQSAHQALL NLEQWLLQNG FIELIKLRNQ
FARSLGYTTF FDYSVQKTEK MSSEQLFEIL EDFEQRTRDA HLNSLENLAK EKGASALTGF
NFVYSFAGDV MRDLDPYVPF SKSLRRWVES FGRLNIDYSG ATLTLDLLDR KGKYPNGFCH
GPIPSFYNQG EWVAAQVNFT SNAKPDQVGS GYDGINTLFH EGGHAAHFAN VKMNAPCFSQ
EFAPTSMAYA ETQSMFCDSL LTDADWLKQY ALDDEGNPVP DEIIQAMINS RQPFKAYEER
SILVVPYFER ALYQLSDDEL TPERITKLAR DCEKQILGLE CSPRPLMAIP HLLSDEAACA
YQGYLLAHMA VYQTRAYFLE KFGYLTDNPE IGPLLAKHYW HAGNHLSHNE TIFSLTGEGF
NAKYLADVCN LSPEQAWEVQ QKKIDSLATR ERAPVASLNA TIKVVDGSKE LASNVISDEQ
MCDDFERYIV ETYGR
|
|---|
| |