| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000881 |
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| Symbol | |
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| ID | 8559194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1010252 |
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| End bp | 1011688 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408553 |
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| Product | transcriptional regulator |
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| Protein accession | YP_003288032 |
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| Protein GI | 262396179 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.458944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTACAG ATTTGTTGGA AAACGGTGAA GGGAATAAGT ACCTCGTGGT GGAAAAGCAC
CTTAAACAAG CCATCAATGG TGGCGTTTAC CAAGTGGATG ATCGACTGCC TTCCATTCGC
TCATTGAGCC AAGAATTAAG CGTCAGCAAA AACACCGTGA TTCGTGCGTA TCAAGAGCTG
GAAGCGCAAA ACTTGGTGTA CTCGGTTCCC AAGTCGGGTT ATCGAGTGAA AATCACCTTG
CCGACTTCTC GCCCAATTCC GGATCCGACT CGCGTGGATT TGCTCTCGAT CTGCAAAGAA
ATCCTCACGT ACCCTGAATA CCAAGAGCGT TTGCCCGCAG GCTCTGCCCA CCCAAACATT
GACTCCCCCG CGATCAAAAG CTTGTACGCC GAGATTGGCC GCCACAGCCG CCAGCAAACG
CATGTACCGA GCCATTACCA ATTACCACCC GGTGATCACC TCTTAATCAA ACAACTGGCG
AAAATCACGC AAGATTTGGG CACGCCAGCC AAGTTGGATG AGATCATGGT GACGCACGGC
GCGCAACAAG CAATTAGCCT AGCGCTGCGC GCAACGACAC AAAAAGGCGA TATTGTCGCG
GTGGAGTCCC CTTGCTATTT TGGCAACTTA TTGATGCTCG AATCACTCGG CCTCAAAGCG
GTGGAAATTC CGAGTTGCCC ACGAGACGGT ATGTGCCCCG AAGCCTTAGC AAAAGCAATG
GCGACATGGG ACATAAAAGC GATCATCGTA ACGCCAAACT TCACCAACCC AACTGGTGCC
ATGATGCCGC TAGAAAAGCG CCGGCAATTG CTATTGGCGT CTGGCAATAT TCCTATTATC
GAAGACGATG TGTTTGGCGG GTTAAGTTAT AACAAGCCTT TGCCAAGCTT GAGGTTGCTC
GATGACAAGC AACGCGTAAT TTACGTGAAT TCGTTATCCA AAACGCTCGA TTCGCGTTTG
AGAATTGGTT GGATGTTAGC GGGGCGATAT CGAGATCAAA TTGAGCAATA TCTACTGTGT
GAAAACATGG GCAGTTTGAA CCTGATGCAA TCAGCCGTGG CAACGTTTCT AACGTCCGGT
AAGTATCGAA CGCATACTTC GCGAATGGGT CGGGTTTATC AAAACAACAT GCGCCGATTT
ATCCAGATGC TTCATCAATA CTTGGATGAA TACGAATCTC TAAAACATCG ATACCAGATC
AACGCCGTAC AAGGCTCGTT CTTGCTTTGG TTGCGCCTGC CCGAAGACAC GGACAGCTAT
GCGTTGTATC AAGCGTGTAA TCAACACAGA ATCAGCCTAC TTCCCGGTAC CGTATTTGGC
ACTCAAGGGC AATATCGACA TTGCGTGCGC CTCAGCGTGG CAAACTTTGG TAGTGAAACC
GATTGGAGTA ACGCGATGCA AACATTGGCA AAATTGATAG CAAAGCATGT CTGTTAA
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| Protein sequence | MGTDLLENGE GNKYLVVEKH LKQAINGGVY QVDDRLPSIR SLSQELSVSK NTVIRAYQEL
EAQNLVYSVP KSGYRVKITL PTSRPIPDPT RVDLLSICKE ILTYPEYQER LPAGSAHPNI
DSPAIKSLYA EIGRHSRQQT HVPSHYQLPP GDHLLIKQLA KITQDLGTPA KLDEIMVTHG
AQQAISLALR ATTQKGDIVA VESPCYFGNL LMLESLGLKA VEIPSCPRDG MCPEALAKAM
ATWDIKAIIV TPNFTNPTGA MMPLEKRRQL LLASGNIPII EDDVFGGLSY NKPLPSLRLL
DDKQRVIYVN SLSKTLDSRL RIGWMLAGRY RDQIEQYLLC ENMGSLNLMQ SAVATFLTSG
KYRTHTSRMG RVYQNNMRRF IQMLHQYLDE YESLKHRYQI NAVQGSFLLW LRLPEDTDSY
ALYQACNQHR ISLLPGTVFG TQGQYRHCVR LSVANFGSET DWSNAMQTLA KLIAKHVC
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