| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000691 |
|---|
| Symbol | |
|---|
| ID | 8558996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 800628 |
|---|
| End bp | 801242 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 646408355 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_003287842 |
|---|
| Protein GI | 262395989 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA AAACATGGCT AATGACAGCC CTTCTAGCAA CATGTTCTGT TGCAAACGCA
GCTCCTTACG TTGGTGCATC GGTAGGTCAA GCATCGTTTG GTGATGTTAA TGGCTCTATC
AATGGTGGTG GTACTAACGC TAGCACTAAA CTTAAACTTG AAGATGACTC AAGCCTTTCA
GGCAAAGTAT TCGGTGGTTA CAAATTCAAC GAATACATTT CTCTAGAAGC AGCCATTGGT
GGCTACGATG CTTTAGACGG CAAAGTTGTT ACTGTTGGTG ATATGAAGTA TTTATCGATT
CAACCAAAAG CGACTCTACC TATTGGTGAT CGTTTCAACC TTTTTGCTAA AGCTGGTCTT
TCTTACTTCA ATGCTGAATT CAAAATTAGC AACTCTGTGA TTGACGGTAG CGCAGGCCAT
ACCACCATTT CTGACAGTAC TGTAACAGGC ATGTACGGTT TAGGTGCAGA GTTCGCTATT
ACTGAAAACT TTGCTCTGCA AGTTGAATGG GAATACATGA TGCCTGAGCT AGACATTGCG
AAATTTGGCA ATGAAAAAGT AACGGTTGAT GCAGACATCA ATGTGTTCTC TGTAGGTATG
AGCTACCGTT TCTAA
|
|---|
| Protein sequence | MFKKTWLMTA LLATCSVANA APYVGASVGQ ASFGDVNGSI NGGGTNASTK LKLEDDSSLS
GKVFGGYKFN EYISLEAAIG GYDALDGKVV TVGDMKYLSI QPKATLPIGD RFNLFAKAGL
SYFNAEFKIS NSVIDGSAGH TTISDSTVTG MYGLGAEFAI TENFALQVEW EYMMPELDIA
KFGNEKVTVD ADINVFSVGM SYRF
|
|---|
| |