Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000664 |
Symbol | |
ID | 8558969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 771969 |
End bp | 772757 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646408328 |
Product | putative permease of ABC transporter |
Protein accession | YP_003287815 |
Protein GI | 262395962 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAACG TTAATACTCG ATTCCATAAA ACAGTGGTTT ATTCCATTGT TGGGATCATG CTCATCCCGA TTTTAGCGAC CTTTGTCTAT TCGCTTTCAT CACGCTGGGG CGCCACGGTG CTTCCGGATG GTTTCACTTT TGATTGGTAC GTTAAATTGC TGACCGACCC ACGTTTTTTG CAAGCGTTTG GGCGTTCGCT GTTTATTTGT ATTGCTTCGC TAACCCTCAG TGTGCTTCTG GTTCTGCCAG CGATATTCGT GGTGTTTTAC TACTTCCCGA AGCTCGATAA GCTCATGAAC GTACTAATTT TGCTACCATT CGCTGTACCA CCAGTGGTGT CATCCGTCGG CTTGCTTCAA CTTTATGCTG ACAGTGAAAT ATCTCTTATC GGTACCCCTT GGATTTTAAT AGGCACTTAT TTCACCATCG CGTTACCGTT CATGTATCGT GCGATTTCTA ATAGCTTCGA AGCAATTAAC CTTAATGATT TAATGGATGC TGCACACTTG CTAGGGGCAA GCACAACCAA AGCGTTTTTG ATGGTCATTT TACCTAACCT CAAAAAAGGA TTGATGGCAT CGCTTTTCCT TTCATTTTCA TTTCTATTGG GAGAGTTTGT GTTCGCCAAT ATTTTAGTCG GCACACGTTA TGAAACCCTG CAAATCTACT TGTATAACAT GCGTCAGACG AGCGGCCACT TTACGTCTGC CTTAGTGATG ACCTACTTCC TATTTATTTT TTTACTGACT TGGTTGGCAA GTCGTTTCAG CCGAGGAGTC AAACAATGA
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Protein sequence | MHNVNTRFHK TVVYSIVGIM LIPILATFVY SLSSRWGATV LPDGFTFDWY VKLLTDPRFL QAFGRSLFIC IASLTLSVLL VLPAIFVVFY YFPKLDKLMN VLILLPFAVP PVVSSVGLLQ LYADSEISLI GTPWILIGTY FTIALPFMYR AISNSFEAIN LNDLMDAAHL LGASTTKAFL MVILPNLKKG LMASLFLSFS FLLGEFVFAN ILVGTRYETL QIYLYNMRQT SGHFTSALVM TYFLFIFLLT WLASRFSRGV KQ
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