Gene VEA_000664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000664 
Symbol 
ID8558969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp771969 
End bp772757 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content43% 
IMG OID646408328 
Productputative permease of ABC transporter 
Protein accessionYP_003287815 
Protein GI262395962 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAACG TTAATACTCG ATTCCATAAA ACAGTGGTTT ATTCCATTGT TGGGATCATG 
CTCATCCCGA TTTTAGCGAC CTTTGTCTAT TCGCTTTCAT CACGCTGGGG CGCCACGGTG
CTTCCGGATG GTTTCACTTT TGATTGGTAC GTTAAATTGC TGACCGACCC ACGTTTTTTG
CAAGCGTTTG GGCGTTCGCT GTTTATTTGT ATTGCTTCGC TAACCCTCAG TGTGCTTCTG
GTTCTGCCAG CGATATTCGT GGTGTTTTAC TACTTCCCGA AGCTCGATAA GCTCATGAAC
GTACTAATTT TGCTACCATT CGCTGTACCA CCAGTGGTGT CATCCGTCGG CTTGCTTCAA
CTTTATGCTG ACAGTGAAAT ATCTCTTATC GGTACCCCTT GGATTTTAAT AGGCACTTAT
TTCACCATCG CGTTACCGTT CATGTATCGT GCGATTTCTA ATAGCTTCGA AGCAATTAAC
CTTAATGATT TAATGGATGC TGCACACTTG CTAGGGGCAA GCACAACCAA AGCGTTTTTG
ATGGTCATTT TACCTAACCT CAAAAAAGGA TTGATGGCAT CGCTTTTCCT TTCATTTTCA
TTTCTATTGG GAGAGTTTGT GTTCGCCAAT ATTTTAGTCG GCACACGTTA TGAAACCCTG
CAAATCTACT TGTATAACAT GCGTCAGACG AGCGGCCACT TTACGTCTGC CTTAGTGATG
ACCTACTTCC TATTTATTTT TTTACTGACT TGGTTGGCAA GTCGTTTCAG CCGAGGAGTC
AAACAATGA
 
Protein sequence
MHNVNTRFHK TVVYSIVGIM LIPILATFVY SLSSRWGATV LPDGFTFDWY VKLLTDPRFL 
QAFGRSLFIC IASLTLSVLL VLPAIFVVFY YFPKLDKLMN VLILLPFAVP PVVSSVGLLQ
LYADSEISLI GTPWILIGTY FTIALPFMYR AISNSFEAIN LNDLMDAAHL LGASTTKAFL
MVILPNLKKG LMASLFLSFS FLLGEFVFAN ILVGTRYETL QIYLYNMRQT SGHFTSALVM
TYFLFIFLLT WLASRFSRGV KQ