Gene VEA_000660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000660 
Symbol 
ID8558965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp768236 
End bp768964 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content45% 
IMG OID646408324 
Producttranscriptional regulator 
Protein accessionYP_003287811 
Protein GI262395958 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCGA CAGGCACCGG ACAATTTGGT ACCCAATTAG GAAAAATTAG AAGCAGCTTA 
AAGCAGCAGA TTCTTTCCGG CATCATGTCG GAAGGACAAA AATTGCCATC AGAAAGAGAG 
CTCAGTGAAC TATTTTCTAC GACTCGAATC ACTATCAAAG ATGCATTGGT GTCTTTAGAA 
ACTGAAGGCC TGATCTACCG AGAAGAGCGT CGTGGCTGGT ACGTATCTCC AGAGCGGATC 
TGTTACAACC CGTTGTCTCG TTCTCACTTC CATCAAATGA TTAGAGAGCA GCATCGTATT 
GCAGAAACCA AGTTACTCAA CGTACGAAGT GAAATGGCTG CAGGTGAATA TGCAAAATCG 
TTAGAGGTTG AGCGAATTAC CCCAATTTAT GTGATTGAAC GGTTGCGTTT TATTGATGGG 
CGAGCGGTAT TGTTTGTTGA AAATGTACTC AAATCGGCAC TGTTTGAAGG CATATTGTCC 
GAGAACCTCA CCATGTCGCT GACGGGCATT TATCGTGAGA AGTATGGTTA CGAGACAAAG 
CGCTCACGTT TTGATGTGAT TCCAACGTCA GCGCCTGCTC ATGTCGCTAA AGCGTTGAAC 
TTGGCTGAAG GACAGCCGGT TCTGAAAATT CGTCGAGTAA ACTACAAACA AGATGGCAAA 
TTAATGGACT GCGAATTTGA GTATTGGCGT CCAGACGCAG TGATAATTCG CATTGATAGC 
GTGGGATAA
 
Protein sequence
MRATGTGQFG TQLGKIRSSL KQQILSGIMS EGQKLPSERE LSELFSTTRI TIKDALVSLE 
TEGLIYREER RGWYVSPERI CYNPLSRSHF HQMIREQHRI AETKLLNVRS EMAAGEYAKS 
LEVERITPIY VIERLRFIDG RAVLFVENVL KSALFEGILS ENLTMSLTGI YREKYGYETK 
RSRFDVIPTS APAHVAKALN LAEGQPVLKI RRVNYKQDGK LMDCEFEYWR PDAVIIRIDS 
VG