| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000561 |
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| Symbol | |
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| ID | 8558866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 658817 |
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| End bp | 659818 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408225 |
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| Product | AraC-type DNA-binding domain-containing protein |
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| Protein accession | YP_003287712 |
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| Protein GI | 262395859 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.105834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGG TTCGATTTAT TCGCGCGATG GGCATTCTAA ACATGCATAA CCTCGCGTTA
TCTAAATATA ATTTGGGCTC GGATGAACTG GGGATTCCGT CGTCGGTATT TCACAACCCA
ATGACACTGA TCCCGCTAAA AGCCGTCGCA GAATGGTATC GTTGTGTTGA ACAAGCCAGT
AGTGATCCAG ATGTGGTTTT GAGTCTCAGC CGAGGTATTG AACTGCAAAA GCTTGGACCT
GTGGGACGCT GGCTATTTTC TGGGAATGAT TTAGCCAGCG CGATTCGACG CGTTAATTAT
GGTGCGAGTA ACTTACAATC TGGGGCGTTT TTTGCTGGCG AACAGTCGGG CAAAATCATC
AAATGGACTT ACCACAATCC GTTTATAGAA ACGTCAGTAA AGGTGCACGA TAGTATCCGC
TGTGCGGTAT TTATGATTAA AGTGCTACGC GAATTTCTTG GTAAAGACTA TCAGCCTTTG
CGCGTGAAGG TTTCAGGGTC GAGAAAAAAT ACTGAACCAT ACCGAGAATA TTTCGGCTGC
GAGGTGGAAT GGAGTCAGCC AAAAACAGAA ATATGGATCC CGGGAGATGA CCGATTAGCT
TCCCGCCAAG TGAGCCATCG CGAGGACAGC CGTCTAGCGA TGAGTTTTTC CGATTTGGAT
GATTTGCTTA ATATGCCCGA CCCAGAAGAT GAGTTGAAAG TGATTTATGA AGTGGTGAAC
TACAGCAGTC ATTATGGATT GCCAACGTTA GAGCGCGTTT CTTCTCTGCT TGATTTATCT
GAACAGCAGT TTCAACGTCG TTTGCACAAA TTAGGCCTCA ACTTCTCGAT GGTATCCGGC
TATGTATTGA GTAATGTTGC GGCTGGGTTA TTGAGTAAGC GCGTGAGTAT TGATGACATA
GCCATGCGCC TTGGTTACAC CAATGTGGCG AGCTTCAATC GTATGTTTAA GAAACATCGT
GGATTAACGC CCAAGCAGTA TGCGGGAAGA TTAGAAAAGT AA
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| Protein sequence | MKTVRFIRAM GILNMHNLAL SKYNLGSDEL GIPSSVFHNP MTLIPLKAVA EWYRCVEQAS
SDPDVVLSLS RGIELQKLGP VGRWLFSGND LASAIRRVNY GASNLQSGAF FAGEQSGKII
KWTYHNPFIE TSVKVHDSIR CAVFMIKVLR EFLGKDYQPL RVKVSGSRKN TEPYREYFGC
EVEWSQPKTE IWIPGDDRLA SRQVSHREDS RLAMSFSDLD DLLNMPDPED ELKVIYEVVN
YSSHYGLPTL ERVSSLLDLS EQQFQRRLHK LGLNFSMVSG YVLSNVAAGL LSKRVSIDDI
AMRLGYTNVA SFNRMFKKHR GLTPKQYAGR LEK
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