Gene VEA_000552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000552 
Symbol 
ID8558857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp649875 
End bp650330 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID646408216 
Producttranscriptional regulator 
Protein accessionYP_003287703 
Protein GI262395850 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGT TTGATCACAA GATTGTGGAT CTTCTCCGAC ACAACGCTCG GCTGTCGGTG 
ACTGAAATTG CGGATAAAGT GAACCTTTCT CGTTCTGCGG TGACGGCTCG TATTCGTAAG
CTAGAACATG ACAAAGTGAT TCTCGGGTAT CACGCTGAAA TTGCCTCTTC AGGCGGGGAC
TCGATTTGTG CTTATTTTGC TCTAAAGTTC GATAAATCTA CATCCACATA TTATTGCGAA
TCATATGCCG ACGAACTATA CAAAATCGAT GGCGTAAAAT GGTGCCATGC AATCAGTGGT
GAAACGGATA TGATGGTTTT TGTCGAAGTA CCTACGATGA CTCGTTTGAA CGAAATCAGA
GATCAAATTC AACGTTACCC AGAGCTAAGG CACCTCATGA CTCATACCGT TTTAGCTGAG
TTCTTTAATA CAACTGGCAA CCAGTTTGTG AAGTAA
 
Protein sequence
MDKFDHKIVD LLRHNARLSV TEIADKVNLS RSAVTARIRK LEHDKVILGY HAEIASSGGD 
SICAYFALKF DKSTSTYYCE SYADELYKID GVKWCHAISG ETDMMVFVEV PTMTRLNEIR
DQIQRYPELR HLMTHTVLAE FFNTTGNQFV K