Gene VEA_000550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000550 
Symbol 
ID8558855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp648207 
End bp648821 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content45% 
IMG OID646408214 
Productputative threonine efflux protein 
Protein accessionYP_003287701 
Protein GI262395848 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAA CAGTTTGGTT ATCACTTTTT ACCGTGTGTT TACTAGGCGC TATGTCTCCT 
GGGCCTAGCC TAGCGATTGT GGCAAAACAT GCCCTGGCTG GTGGACGCAT CAATGGTTTG 
GCAACGGCTT GGGCACACGC TTTTGGAATT GGCATTTATG CCTTTATTAC TTTGATTGGC 
CTCGCTGTTG TTTTGCAGCA AAGCCCGATG TTGTTCAAGA CGATCAGCCT TGCAGGCGCG 
GCATATCTTG CATATTTAGG GTTCAATGCG CTGCGTTCGA AAGGCGGTGT GGCGGCGAAG 
TTGGAGTCAG GAGAAGAAAC AACGGTAAGT CAGTCTGCAC GGGAAGGCTT TTTTATCTCG 
ATTTTAAGCC CCAAAATTGC CTTGTTTTTT ATCGCACTAT TTAGTCAGTT TGTAGCGCTA 
GGTAATGATT TGAGCAATCA AATGATCATT GTTGCTACAC CATTTGTTGT GGACGGGTTT 
TGGTATACCT TTATCACCCT AGTGTTATCG AGCTCCAAAG TAGTGGACAG AATTCGTTCT 
AAAGCGGTGT TAATTGATCG TTTGTCAGGG ATTGTTCTCA TGCTATTGGC ACTTCGAGTG 
GTCGTAACCG TATAA
 
Protein sequence
MTLTVWLSLF TVCLLGAMSP GPSLAIVAKH ALAGGRINGL ATAWAHAFGI GIYAFITLIG 
LAVVLQQSPM LFKTISLAGA AYLAYLGFNA LRSKGGVAAK LESGEETTVS QSAREGFFIS 
ILSPKIALFF IALFSQFVAL GNDLSNQMII VATPFVVDGF WYTFITLVLS SSKVVDRIRS 
KAVLIDRLSG IVLMLLALRV VVTV