| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000543 |
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| Symbol | |
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| ID | 8558848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 641569 |
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| End bp | 642852 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408207 |
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| Product | Na+-driven multidrug efflux pump |
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| Protein accession | YP_003287694 |
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| Protein GI | 262395841 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTGGC CAATGCTATT TGGCGTTCTA TCTTTAATGA GCTTCCAGCT TGTAGATAGT
GCGTTTATCG GTCAGCTCGG CGTTTTACCT TTGGCCGCTC AAGGTTTTAC TCTTCCGTTG
CAAATGGTCA TTATCGGAAT TCAAGTCGGT TTAGGTATCG CCACGACCGC TGTCATTTCT
AAAGCGCTTG GTGCGAATGA AAGTCGTTAT GCCAAACAGC TCGGTGGCTT AGTTTTGATG
ATTGGCTCAA TCGGTGTAGC CGTTTTTGGA GGGCTAATTT GGCTTTTGCG CTACCCCATT
TTATCTCTAT TAAGTGCTCC AGAGTCTGTG ATGCCGATTA TCGACAGCTA CTGGCCTTGG
TGGCTGCTAA GTTCATGGAC TGGCGCGGTT TTATATTTTT ACTACAGTAT TTGCCGGGCT
AACGGCAACA CCATGTTGCC TGGCACAATG ATGATGGTAA CCAGCGGCGT GAACCTTGTG
CTCGATCCAC TATTTATTTT CACGTTTGAC TTGGGTATTA ACGGAGCAGC AATAGCAACC
ATCGTTGCTT TTGGGTTTGG TATTTTAGTC GTCGCGCCTC GCGTAAAGAA GAATCACTGG
GCAACAACGC AGTGGCAAGA CCTCAACGTA GCTAAAAGTG TTGCGTCTAT CGGTAACATC
ATGGGACCTG CGATGATCAG CCAACTGCTG CCTCCGTTGT CGTCCATGTT AGCAACAAAG
TTATTGGCAA GCTTCGGGAC CGCCGCAGTC GCCGCTTGGG CGCTCGGTTC ACGCTACGAA
TTCTTTGCTA TCGTTTCGGT GTTAGCGCTG ACAATGTCTA TGCCCCCAAT GGTCGGGCGC
TTACTTGGCG CAAAGAACTA CCAAGATATC CAATCGCTAG TCAGTATTGC CGTAAAATTC
ATTCTGGGCT TTCAACTTTT GATCGCAGCC ATTACGTTTG CCGTCGCAAA CCCACTTGCA
CTACTGATGA CCAGTGATGT TCAAGTAGAG CAAGTATTAG AAATGCATTT GCTGATTGTT
CCTATCAGCT TAGGTTCACT AGGTGTATGT ATGTTGATGG TTTCTCTTTG CAATGCATTA
GGTAAGTCTT ACACCGCGCT CACCATTTCA GCGCTACGCT TGTTTGTCTT TTTCCTTCCT
TGCTTATGGG TTGGCGCTCA AATGGGGGGA ATCCGAGGTC TACTTTTAGG CGCTTGTATG
GGCAACATTC TGGCGGGCAT TTCCGCTTAC CTAACCTATC GACAAACCAT ACGTAAACTC
GCTGGCGCTC AAGCAAACGC ATAA
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| Protein sequence | MTWPMLFGVL SLMSFQLVDS AFIGQLGVLP LAAQGFTLPL QMVIIGIQVG LGIATTAVIS
KALGANESRY AKQLGGLVLM IGSIGVAVFG GLIWLLRYPI LSLLSAPESV MPIIDSYWPW
WLLSSWTGAV LYFYYSICRA NGNTMLPGTM MMVTSGVNLV LDPLFIFTFD LGINGAAIAT
IVAFGFGILV VAPRVKKNHW ATTQWQDLNV AKSVASIGNI MGPAMISQLL PPLSSMLATK
LLASFGTAAV AAWALGSRYE FFAIVSVLAL TMSMPPMVGR LLGAKNYQDI QSLVSIAVKF
ILGFQLLIAA ITFAVANPLA LLMTSDVQVE QVLEMHLLIV PISLGSLGVC MLMVSLCNAL
GKSYTALTIS ALRLFVFFLP CLWVGAQMGG IRGLLLGACM GNILAGISAY LTYRQTIRKL
AGAQANA
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