| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000452 |
|---|
| Symbol | |
|---|
| ID | 8558758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 519033 |
|---|
| End bp | 523808 |
|---|
| Gene Length | 4776 bp |
|---|
| Protein Length | 1591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003287605 |
|---|
| Protein GI | 262395752 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGACT TATGTACTTA CGATAAACCA ATGTACTTGC TAGGAGTGTA TTTTCAAGGT
GAAGAAACAG AAGCAGGACG CGAGTTCAGT AATTGGAATA CAGTGTCAGA CTTAACCAGC
GTAAATCATG TAAAGAATGT TCGACCTATC CCATTTACCC CAATACTAAT AGATGCTCTC
TCTCAAGACT CTGTAACTTT GCCTAGGTTT TGGGGAAGTG ATCAATATGG CAGGCTATGT
AAGGTGTCGT ACTTAAGTGA AGCCGAGGAG AGTAAACCGC AAGTGCTTCT TCGCCATAAC
AGCCCCATCA CAACGATTGA TGATGCCCAT GACTATGAGA TGCTTTTTCC ACCAACTAAT
TTAATTGGTC AATTGGCGAA AAGTTCATCA TCTATTACTG AAATTAAGGA AACCATAAAG
TCCCTCTATA CGAAAATGAG TCCTCAGTTA AATCAGCCGA GGCTTTTTAA ACCGTCGAAA
GTTTCAGTAA AACAACTTGC GAAGCCTTAC ACTCAAGAGT TTGGGGCGTT ACTTTCGCAA
GAAGAAGAAA ACTACAACCA ATGGTATGCT GATATTCAGT CATCTGGTGT TGAGTTTATT
GAAGGGTTTG TTGTACCCAG TGTAAATACC ATTAGCATAG TGTTTAGCAG CGATATTTAC
ATAGGTGCTG AGGTGTCATT AATAAAATAT CGGAGCCACC TTGAAAATCA GCAGCAAACC
TCAGAACAGG TGTTAGCAAG GGGGATTGTA GTGCGGCCTT TTTATGATGA TGAAGATCAA
GAGTCGCAAG AATTTAACGA CACTTTACCA TCTGTATCAT TTAATCTACC GTCGGTCATC
GAACCTTCAA GTTCTGAGTC AACCTCAGAA GGTAATCACA TCGTACTTGG GGATGGTTTC
TACGGTCTGA GGGTTCAGTT CTTTGTTCAG GATTATCTTA AAGAAAATAA GCGTCTTCAA
AATAAGTTTC CTGAAGTTAT CAAGTCTGGA CGACTTCGAT TTGAACGTAA TAAATCGTCG
GCGGTTACTG GCCTAGAAGA GCAGGATTGT TATACCTACG AATTGAATGA AAAGGTAACG
TTTAAATCAA TCAGTGGTTA CGGAAAACTA GCCATTGTGT GTGGCGACAT GATCTCTCTT
GAAGAATGTT TGTTTTACCA GTACCCCCAA GCATTACCTT CCAATTACAG CGAGTTGATG
ACAAAAACTG GTAAATCCGT TCCTCTCTCT GGGACAGGTG TCAATACACT CGGTTTAGCG
TCAGCAATCA AAAAGAACGC GGAAAGTCTG GCTGAAGGTT TTCTGATGGG AGGGAATCCA
TTTTCAGATA ACCTGAAAGC AACCATGTTT AGTGTCTCTA AAGGTATCTG GTCGGACATA
GAGAAACAAA AACTGCCCGA TTTAATGACC AGTAGTGTTG CACTCGCTTT TGGCTTTTCA
GCATTTAAAG AAAGCCGTAA AGAATTGACC AAGGCGATAA GATTTGCCAA TAAGGGGCTC
GACTTTAATC AGGCGGCGGC CTTGGCGTTT CGAAAGAGCG GTATGAACAT CTCTTTTATT
AAACGCGAAC TCGATGTGAT AAAAGCTAAC TTGATCACGG GTACATTCAG CGAGAACTCA
ACACGACTTG CGAGGTCATG GTTTAATGGC TCCGTTATGG AGAAGATGAA CCGAGCATTT
CCAATTCTTG AATCTGGCTC TAGCTTAGTT GACTTGTACG ATTTGGTGCA AAAAGAAAAC
GAGCTTGAGA AGAAGTCTCT TGAAGCCAAA GAAGATTTCG ATGCGGTATC TCAAAGTTAC
CTTCAATCTA TTTCAGTTAT TAAAGCGTAT CAAGAATGGG CACAAGCGTT AGACGATGCT
AAAAACGTCA TCAATGGTAG CGATGGTGAG GAGATAGCCC ACATAGTTGA GGACAGCCAA
GGGTTAGCGA TTCATATCAA CTTTAAGTTC AACGAATGGC AACATGGCAA TGAGCACGGC
AAGCTGAGAA CAGACATTAA ACAAGTGTGT AAGTATTTGT CGCAATTGAT GCTAGATAAC
CCAAGCTACA AGGTATCGAT AGAAGGGCAT GCTGGTAGGA TTGGTTCTTC TGATGCGAAC
GCTCTCGTGG CTGCTAAACG TGCAAAGACT GTTACTAACG CGATTATCTC CATTGACCCC
AGCTTGGAAG AAAGGGTTTA CACAGCGTCT TATGGCAATA CTCAGCCGCT CACGGCTGAT
AGTACCAAGA GCGATATGTC ACAGACCGGA GACAGCGCAC CTGCAGCCCT AGATCGACGA
GTTGAAGTTC GCTTGATTAT TCCTAACTAT CAAGTTGTTT TACCACCGAG CCGCAGCGGC
ATGGTGGAAT TAGAGAAAGC ACGTCAGTTG AAGCAAGCAT TGGATGTTGG CTTAGATGAT
ACGCAGAAGG CGCAAGTCGC GGCGGTGTTA ACCACTCTTA GCGGGTTTGC GATGTTTACA
CCGTTAGCTC CGCTTGCTGC GGGCATTTTG TACCTAAGGT CGGGAGCAGA ACTCGCAGAC
TGCGCGCTAT CTGTGCTGGA CGAGCTCATT ACTGAAAAAG CCTATTCTGA CTTTAAAGGA
CGTTATCAGA ATATCGACCA ACTAAACCAG TTGGGTAAAA TCCATATTCG AGTTCTTCAG
CAGTACAGAG ATCTAGAGGT AACGATTGAG CGTAGTGAGA TAAAAACACG TGATGAAGTT
GAATCTCACC TGAAGAATAA AGAAACGGTG CAAGAGTTGC AGAAACGATT TTTACTCCGT
GCTCTTGCGC TTAATGGGCT CGTGGAACTG CTTGCTCGAA TTTCGCTTTG GAACCCTAAT
GTTTCTAAGT TGCAAGGGTT GCTTGAGGAA TATCGAGTTA AGGATTACAT CGATGTTTAT
GTTATCAATG ATAACTGGGA GGCACCGTTA AGTAGCTATA ACACCATGGC TCAGAATTGG
ATACAACGAG TTAGGGATGA TAAGTCAGGT GTAAGTGCTG CCCGTGCTTT TGCTCAATCT
TGGAAAAATG AACATTCGCC ACAATTGTCA CCTTTGTTAA AGAGAGCTCG CATTCAAGGG
GAGTTCAATA AAGGCTTCCC AGTACAAGCC CGTCTATATC AGGGAGATGC GGACAATGGC
TTTTCCGATT TCGCGAAAAT GTTCGATAAC AATGTGGAGT CGATTAAATC GGACGATATT
GGCTTCAGCC GTTTGCTAGT TGATAGTAAA GGGGATGGGG TTTCTTGGAA GCCGCTTGAA
GAGTGGATTT CCCCAAATAA AACCAATCGA ATTACGCCTT TTACACGTGT TAAGGTACAG
ATTGTATTAT CAAGTAATGC CTCTAAATCT AAAAAGAAGA TATTTAAGAC AACTTTGCAA
TATTGTTGTG AGCGGTCGCT TTGGGACTTT AAAGGGCCAA GCTTTGAGGT TTTGATGGCG
CCGCGAAAAG CGGATGATCT AACTTTGTGC GGAAGCAACG ATAAGCTAAA AAGTTACTTT
GACCAACACG CAGTTGAAGA GCATCTGACA TGTGTTGAAT TTGAGCCAAC ATATTGGTTC
GGCGAATATG AAATCCCAGG TCTTAAGCCT TTATACTCAA ATTACGAGAT GCAAAGCTTC
GATAAATGGA AACAAAGTGG AGAAGCTCGC TCAATGCAAT ACTATTTCAC TGCTGATGGG
AATACGTTGT CTCTAGCAGG TACTGAACAG CAGTTATCCA AGTTTAACTA TGGTGTCGAT
GACAATAATA CCTATGGTAA GCAGTGTTAT CTGAATGACG ATGGAGAAGT CGAGGTTGAT
GGTTTACCAC TTGTTCTATA CGACGGTCTG GCGAATAGGC AAGTAGTGAT TAACGAATAT
GATTTACTAA TCGAAGAGTT TGTTAAAAGT GCTTCTGCTA AAAAAACTGA AGGTATTGCT
CCGTATCTAA AAGGTGATGT TTCGAGCTTT AGTGCTGTTT CGAAAGGGAG TGGTTTTGAG
TGGTTCGATG ACAAAGCACC AAAATCCTCC GTGCTTGATT GGTCCAATGA CAAGCCAGTC
ACTATATATG TCGCTTTACT TTCCGAAGGG GGCGAAAAAG AGACATATAA GCGCATGATG
GGAGAGGGCT ATCGGGTGCC AATGCGGTTA TCTTTGTCGA TTGAAGAGCA AGAATCGATG
TTTTCAAAAG ATACGACTGA AGGGCCAAGT TTCTTTGGTT CATTGCTTGA AGTAGGCGAG
TACACTTATA AGAAAGAAGT CCCTTCTCCT TATGCAAAAG TAGAAATTAA AGAGGTGAGT
TTCACTGAGG CTGATACTGA GATTACATCG GATCTAGCCT CTTTCGTTCA AGAGTTTCAG
GCGAAAGTCA AGGACGCTCC AAATCGATAC CTAGACCCAT TTAATGACCG TAGAACGCTG
CATATTGTTA AGTTTGAGCT TAGATACACC TCTCCTACGG GACGACGAGT GCCTACTTTA
AGGCCATTTG GTCCTATAGT AGACAAGAAA AAAGCAGAGT TCTTACCGGT GCATATTTCC
GTATCATCAC TATCGCAAAC GGGGCTTGCC CCCGGTGTAG GGGAGTACCC TATAAAGCAG
TCTCAGAAAT TGTCTTTGCC TGGTGGTCAA AAATACAGTG TGGAAGGTGT GCCTTGGATG
GAGATTGAAG GAGATGCTTC TCGAATGAAT GATTCGGCTT TTCTCTACTG GCAAAAAGAG
TTAGCGAACA ACCCAGTGAA ACGAAAAGCA TGGATCGAGG ATTGGATTAT GAAAGAACCA
ATGAATGTTA GTGCTCCGCA GCAAGAATCA ATATAA
|
|---|
| Protein sequence | MVDLCTYDKP MYLLGVYFQG EETEAGREFS NWNTVSDLTS VNHVKNVRPI PFTPILIDAL
SQDSVTLPRF WGSDQYGRLC KVSYLSEAEE SKPQVLLRHN SPITTIDDAH DYEMLFPPTN
LIGQLAKSSS SITEIKETIK SLYTKMSPQL NQPRLFKPSK VSVKQLAKPY TQEFGALLSQ
EEENYNQWYA DIQSSGVEFI EGFVVPSVNT ISIVFSSDIY IGAEVSLIKY RSHLENQQQT
SEQVLARGIV VRPFYDDEDQ ESQEFNDTLP SVSFNLPSVI EPSSSESTSE GNHIVLGDGF
YGLRVQFFVQ DYLKENKRLQ NKFPEVIKSG RLRFERNKSS AVTGLEEQDC YTYELNEKVT
FKSISGYGKL AIVCGDMISL EECLFYQYPQ ALPSNYSELM TKTGKSVPLS GTGVNTLGLA
SAIKKNAESL AEGFLMGGNP FSDNLKATMF SVSKGIWSDI EKQKLPDLMT SSVALAFGFS
AFKESRKELT KAIRFANKGL DFNQAAALAF RKSGMNISFI KRELDVIKAN LITGTFSENS
TRLARSWFNG SVMEKMNRAF PILESGSSLV DLYDLVQKEN ELEKKSLEAK EDFDAVSQSY
LQSISVIKAY QEWAQALDDA KNVINGSDGE EIAHIVEDSQ GLAIHINFKF NEWQHGNEHG
KLRTDIKQVC KYLSQLMLDN PSYKVSIEGH AGRIGSSDAN ALVAAKRAKT VTNAIISIDP
SLEERVYTAS YGNTQPLTAD STKSDMSQTG DSAPAALDRR VEVRLIIPNY QVVLPPSRSG
MVELEKARQL KQALDVGLDD TQKAQVAAVL TTLSGFAMFT PLAPLAAGIL YLRSGAELAD
CALSVLDELI TEKAYSDFKG RYQNIDQLNQ LGKIHIRVLQ QYRDLEVTIE RSEIKTRDEV
ESHLKNKETV QELQKRFLLR ALALNGLVEL LARISLWNPN VSKLQGLLEE YRVKDYIDVY
VINDNWEAPL SSYNTMAQNW IQRVRDDKSG VSAARAFAQS WKNEHSPQLS PLLKRARIQG
EFNKGFPVQA RLYQGDADNG FSDFAKMFDN NVESIKSDDI GFSRLLVDSK GDGVSWKPLE
EWISPNKTNR ITPFTRVKVQ IVLSSNASKS KKKIFKTTLQ YCCERSLWDF KGPSFEVLMA
PRKADDLTLC GSNDKLKSYF DQHAVEEHLT CVEFEPTYWF GEYEIPGLKP LYSNYEMQSF
DKWKQSGEAR SMQYYFTADG NTLSLAGTEQ QLSKFNYGVD DNNTYGKQCY LNDDGEVEVD
GLPLVLYDGL ANRQVVINEY DLLIEEFVKS ASAKKTEGIA PYLKGDVSSF SAVSKGSGFE
WFDDKAPKSS VLDWSNDKPV TIYVALLSEG GEKETYKRMM GEGYRVPMRL SLSIEEQESM
FSKDTTEGPS FFGSLLEVGE YTYKKEVPSP YAKVEIKEVS FTEADTEITS DLASFVQEFQ
AKVKDAPNRY LDPFNDRRTL HIVKFELRYT SPTGRRVPTL RPFGPIVDKK KAEFLPVHIS
VSSLSQTGLA PGVGEYPIKQ SQKLSLPGGQ KYSVEGVPWM EIEGDASRMN DSAFLYWQKE
LANNPVKRKA WIEDWIMKEP MNVSAPQQES I
|
|---|
| |