| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000423 |
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| Symbol | |
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| ID | 8558729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 479962 |
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| End bp | 481098 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408089 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_003287576 |
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| Protein GI | 262395723 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.575568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTA AGCCCTCTTT ATGGCTCATG CTGGTTATGT TGATGTTTCC ACAAATTGTA
GAAACCATCT ATAGCCCAGC GTTGAGCTCA ATCGCTCTAT CATTTGATGT AAACCACGCA
CAAGCAGCCC AAACATTGTC GATTTACTTC CTAGCTTTTG CCATTGGCGT TGTAGTTTGG
GGAGTGCTCG CAGATAAACT GGGAAGAAGG CCTACCATGC TTATTGGGCT CTTTATCTAT
AGTTGTGCGT CTTTACTCGC AACTCAAACC GAGAGTTTTG CTGTTGTCAT GGCTGCGCGA
GCCCTGAGCG CATTTGGTAT CGCGGTAGGT TCCGTTGTCA CACAGACCAT GCTTCGTGAC
GCGTTTGACG GTCAAGAACT GAGTAAAGTC TTCAGCTTAA TGGGGATGGG TATATCAATC
AGCCCGGTAG TAGGCATGCT ATTAGGCGGA CAGCTTACAG GGCTTGGTGG ATATCGTTAT
GTATTTTTCG CTTTATTTTT AATCGCGTTA GTATTGCTCG CTTATAACGT TATTAAGCTT
CCTGAAACAC AGAAAGAACA GACACCAGTA CGGTTGCGTC AACTTAGCTG GAAAATGGTA
AGAGACGCGC GAATTTGGCG CTCAGGATTA CTGGTTGCTT TGTATAACAT TGCTCTATTT
TCTTATTACC AGCTTGGCGC ATTTACTTTC TCAGCACTTG GGTATAGCTC CGAACAATTT
GGATACAGTG GCATGGTACT GGGGTTAGGC ACTCTGCTTG GGAGTTATTT AAACAAATCC
CTAGTGTCTA AAAATGTTCG AAAAAACCAA CTACTTTGGC TCTCCGCAGT ATTGCTTAGT
TTGGGATCAG TCGGTGTGTT GATTCTGAGC CAATCAATCT GGTTTGTTGC TCCAATGATG
TTAGTTGTCA TGTCGTATGG GATTGCGATA CCCAATATAC TCAGTGATGC ACTCGTTGAT
TATAAACAAC AGGTAGGTAG CGCAGGTGCT TTATTTGGGC TCATGTACTA CATCATGATC
GGGACGGGAT TAGCGATGGC TGGAACAGTA CAAAACTTAG GTGTCGTTCT ATTAGCATGT
AGCTGTTTAG CAATTTTATT AGCGTTTTCT ACAAAACAAG TTCATACCGA CTTGTGA
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| Protein sequence | MNTKPSLWLM LVMLMFPQIV ETIYSPALSS IALSFDVNHA QAAQTLSIYF LAFAIGVVVW
GVLADKLGRR PTMLIGLFIY SCASLLATQT ESFAVVMAAR ALSAFGIAVG SVVTQTMLRD
AFDGQELSKV FSLMGMGISI SPVVGMLLGG QLTGLGGYRY VFFALFLIAL VLLAYNVIKL
PETQKEQTPV RLRQLSWKMV RDARIWRSGL LVALYNIALF SYYQLGAFTF SALGYSSEQF
GYSGMVLGLG TLLGSYLNKS LVSKNVRKNQ LLWLSAVLLS LGSVGVLILS QSIWFVAPMM
LVVMSYGIAI PNILSDALVD YKQQVGSAGA LFGLMYYIMI GTGLAMAGTV QNLGVVLLAC
SCLAILLAFS TKQVHTDL
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