| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000368 |
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| Symbol | |
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| ID | 8558674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 416350 |
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| End bp | 418371 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646408034 |
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| Product | hypothetical protein |
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| Protein accession | YP_003287521 |
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| Protein GI | 262395668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.508555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTAC TATTGGGGTG TCTGTGTCTT TCTATTCAGG CATCCGCAGA AAAGGTTGAA
CAAGAAGGTA AGTTTTTACA GTCGCTAGAA GGCATTGAAA ATCAAATTTA CGCATTACCT
CAGAGCTCTT TGGCTTTGAT TGAGGCGTTA GAAGAAGACT CTCTACTACA AAATCAACCA
ACAGAGCTAC TGGTACGTTA TTGGCTTGCA AAGTCCACGG TTCTAGAGCT ACTTGGGCGC
GCGGAAGAGA GCCAAAACGT CGCACAAAAA GGGTTGGAAC TTGTGCGTCC ACAAAGCCAT
GAGTATCTCT TATTTAAGTT GATTCAGATG CGAACTATGG TCGGAAAGAG CGATATCGAT
ACCGCGCTTT CTTCGTTGGA TAGTTTGTTG GAAACATCGC GTGAAAATGG CGATAAGCAG
CTCGAGTCGG AGATCCTGTT GCTAAAAGGA CGTTACTACG ATGAGCAGGG CGAGTTTAAA
AAATCCTATG CCGCAATTAT GTCGTCGATG GATGCGGCTG AGTCCTCTGG CGTTCAAGGA
TTGGTCGAAC GGGCGGCGCT AGAGCTTGGT GACGTACTGG TCAAAATTCA GGGCTATGAC
CGTTCAGAAG CATTGTTGGA ACAAGCGTAC CGTTATTTTA GGGATAGACG CATGTCGTTC
AATGAGCTGC TGAGCGTCTT AACGATAGCA AAGCTTCATA AGGCACAGTT CCAATACGAA
GAGGCGATTG TATCGTATCA GAGAGCGCTA AAGCTCGCGC AAATCATTGG TGACGGGCGC
TTTAGGTTTC GAGTTAACCT CGAGCTTGCT GCGTTATACC GTGAGACGAA CCAGGAAAAT
AAGATGGTTC GCCACTTAAA GTTGGCGGAG AACTTACAGT ATAGAGAAAC CTCTAGCGCC
TACTTAGCTA CATTTAAGCT GTTGCAAGCC GAATATATGC TAGAACAGAA GCAGTTTGAG
ACACTTCTAG CGATGATCGC GCCTATGTTG CCGGAAATTA TCGAGAGCCG ATATGTTAAG
CAACAGCAAA TGGAACTACT AAAAGTGGCA GCCATGGCCT ACGCGGGAAG CAATGACTTT
AAACTAGCGT ATAAAACTTA CGGCAACTAT CACGATAAAT TCATCCAATT TAGCAACCAA
AGAGAAGTTG AAAATCTTGA GCGTCAACAG ACGCTATTTG AGCTAGAAAG ACTTGAATAT
GAGAACGAAG ATCTCAACTG GAACAACGTG TTGCAGCGTA TGGAACTGGA AAATAACCGT
CGTACCTTTT ATCTATTGGG TGAAGCGCTA CTAGCACTCA TTGGTGTTCT CTTTTTGATG
GCAGTGGTAT TCCTTGTTGT GAATCGATCA CGTTTAAGAA TGCGCCGCCT AGCAAAGACA
GATACGTTGA CAGGGTTATT CAATCGCCGT TTTTTAGAAG ATTGGTTCAC TAAACCCGTA
GAGACGAAAC GTGAACGCAA AGAAAAGCCG ACGCCTCAAT CTAAGCAAGA AAAGGTGCAG
CATTTTGTGT CTGAGCAAGT CGAGCAAGTT AAGTACGGCT ACCTAGCTTT AAACAAATGG
GTGGATAGCA AACTCGATAA ACAGAAAATG GTGCCAAAGA AGCCGCAGTC GGGGCCGGTA
AGTTTAGCGC TAATCGATGT AGATTATTTT AAACAGGTAA ATGATACCTA TGGGCATGTG
TTCGGTGATG CCGTACTAAC AGGCGTTGCC AAAGTGCTAG AAGAGACGGT GCGTGAAAAT
GACATTGTTG CACGCTTTGG TGGTGAGGAG TTTGTTGTTG TGATGCCCAA TACCGATCAT
GAAGACTCTC TCATTACCGC TGAACGATTA CGTAGCGCTT TATCCTTACA TGGGTTCGTC
ACGGAACAAA ATGAAGAAGT GAGAGTGACC TGTAGTTTTG GTGTTGTGAC GACTGAAGAT
AGTGAGATGA ATTTTAAATC ACTCTGTGAT CAGGCGGATA AATTACTTTA TCAAGCTAAA
GCGGATGGAC GTAACTGCGT GAAAGGGCGC AAGCTGACCT AA
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| Protein sequence | MPLLLGCLCL SIQASAEKVE QEGKFLQSLE GIENQIYALP QSSLALIEAL EEDSLLQNQP
TELLVRYWLA KSTVLELLGR AEESQNVAQK GLELVRPQSH EYLLFKLIQM RTMVGKSDID
TALSSLDSLL ETSRENGDKQ LESEILLLKG RYYDEQGEFK KSYAAIMSSM DAAESSGVQG
LVERAALELG DVLVKIQGYD RSEALLEQAY RYFRDRRMSF NELLSVLTIA KLHKAQFQYE
EAIVSYQRAL KLAQIIGDGR FRFRVNLELA ALYRETNQEN KMVRHLKLAE NLQYRETSSA
YLATFKLLQA EYMLEQKQFE TLLAMIAPML PEIIESRYVK QQQMELLKVA AMAYAGSNDF
KLAYKTYGNY HDKFIQFSNQ REVENLERQQ TLFELERLEY ENEDLNWNNV LQRMELENNR
RTFYLLGEAL LALIGVLFLM AVVFLVVNRS RLRMRRLAKT DTLTGLFNRR FLEDWFTKPV
ETKRERKEKP TPQSKQEKVQ HFVSEQVEQV KYGYLALNKW VDSKLDKQKM VPKKPQSGPV
SLALIDVDYF KQVNDTYGHV FGDAVLTGVA KVLEETVREN DIVARFGGEE FVVVMPNTDH
EDSLITAERL RSALSLHGFV TEQNEEVRVT CSFGVVTTED SEMNFKSLCD QADKLLYQAK
ADGRNCVKGR KLT
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