| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000286 |
|---|
| Symbol | |
|---|
| ID | 8558591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 305587 |
|---|
| End bp | 306741 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 646407951 |
|---|
| Product | response regulator VieA |
|---|
| Protein accession | YP_003287439 |
|---|
| Protein GI | 262395586 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.926031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAC AGCTTAATGT GATGGTGATT GATGGTCATC CTCTACAAAC CAAGATACTT
ACCCAAATAT TGGGTCATAG TGGCGCTTCA GTCAGTACAT TCAATTGTGT GGACACTGCT
AGTCAATGTG CACAAGAGCA ATATTTTGAT GTGATCTTTT GCGATCTCCA GATGCCGGGA
AAAGGCGGTA TCGACATCTT GGAAGTATTC GACCAAATTC AGTATCACGG GCAAGTCGTG
CTAGTCAGTT TGTTGGAGCA GAGCATCATC TCGGCAGTAC GAGAAATGTG CGAAGGGTTT
AGTTTTGAGA TATTAGGAGA ACTGCCTAAG CCGTACGACG AAATGCAAGT GGTTAAACTC
CTCAACCAAA TAAAAGATGA AAGAACGCGA AAAACAGCGT TTGCTCAACC TCTCGTACTG
CAAGACCAAG AGTTTTTATT TGCTTTGGGT GAAGGGCGAG TGAAGAATTA TTACCAACCT
TTGGTAGACG CACACAGCGG TGAGCTTTTA GGTTATGAAG CGTTAGCGCG TTGGGTGCAT
CCGATTTATG GCGTGTTGTT ACCAAACCAC TTTCTTCCGA TCGTAAAACG ATGCCATTTG
TCTTCTGAAC TTTTTCAATC AGTGCTGATT AATACAATCT ATGACATCAA CAATAGGGGA
TTAACCCAAA AGGTCTCGAT TAATGTCGAC CACGAAAACT TGAACGACCC TGACTTCTCG
CATCGTTTTA TTCAACAATG CTCGGAAAGT GGTGTCGACC CGTCACAAAT CACCATTGAG
ATTACAGAGC GGGAAGCTTT CCAAGCTAGC ACGTCTATCT ACAAAAACCT CATCAAACTC
AGAATGAAAG GTGTCACAGT ATCAATTGAT GATTTTGGTA CGGGCTCATC TACATTTGAA
AAGTTGGCAA AGTTACCTTT TAACGAGATC AAACTTGACC GCGTTTTTGT CTACGGAGCG
AGTGAAGACC TGAAAAAGAA AAGCATTGTC ATCGCTATTT GTGCTTTAGC GAAAAGCCTC
AATATTCGTA TTGTCGCAGA AGGTGTCGAA GACGAAGTAA CCTATAAAAC CATGCGCGAA
TGTGGAATAG ACATCTGCCA AGGCTTTTAC ATTGATAAGC CCATGCCGTT AGAGGTAATC
ACTATTTTGA AGTAA
|
|---|
| Protein sequence | MNTQLNVMVI DGHPLQTKIL TQILGHSGAS VSTFNCVDTA SQCAQEQYFD VIFCDLQMPG
KGGIDILEVF DQIQYHGQVV LVSLLEQSII SAVREMCEGF SFEILGELPK PYDEMQVVKL
LNQIKDERTR KTAFAQPLVL QDQEFLFALG EGRVKNYYQP LVDAHSGELL GYEALARWVH
PIYGVLLPNH FLPIVKRCHL SSELFQSVLI NTIYDINNRG LTQKVSINVD HENLNDPDFS
HRFIQQCSES GVDPSQITIE ITEREAFQAS TSIYKNLIKL RMKGVTVSID DFGTGSSTFE
KLAKLPFNEI KLDRVFVYGA SEDLKKKSIV IAICALAKSL NIRIVAEGVE DEVTYKTMRE
CGIDICQGFY IDKPMPLEVI TILK
|
|---|
| |