| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000278 |
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| Symbol | |
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| ID | 8558583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 298222 |
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| End bp | 299127 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646407943 |
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| Product | RarD protein |
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| Protein accession | YP_003287431 |
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| Protein GI | 262395578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAACA CTCGTTATGG CACTTTTATG GCAGCATTCT CCTTTGTAAT TTGGGGGCTG
CTACCCATTT ATTATCGTTA TTTACCGAAT GCTTCAATGG ATGAGTTGCT GGCATGGCGA
ATCATCGGCT CAGTTCCTGT CGGTTTCTTA ATTGTGCTTG GTATAACCCG TCGAGGACCG
AGTTGGAAAG AAATCTGGTG TGACAAAAAA TCTTTGTGGT ACACGTTTGT CGCGAGCAGC
TTGATGTGTA TTTCATGGAG TGCGTTCACT TGGGCTTTGA CTCACCATCG AGTCATCGAT
GCAAGCTTAG GCTTTTTTAT TGGACCGTTA GTGTCTGTGG CACTAGGCGT GTTTATTCTT
GGAGATAAGC TATCAAAAGG CAAACTCATC GCAATTGTGC TAGCAACAAT TGGCGTGATG
TATCAAGTGA TTCATTATGG CCAGTTACCT GTTATCGCAC TAACGATGGG GTTGTTCTTT
GCTTTGTATG GGTTGTACAA GAAGAAGATA ACATACGACT GGAGCACCAC CTTATTTGTT
GAGGCGCTGC TATTGACTCC AGTTGCCGTG GCGTATTTGT TTTACAAACA ATGGACAGTG
GGTGAGTTGG CTTCAGGTGT AGATATCACA ACATTGCTTT TGTACTTTGG CAGCGCACCG
ATCACGCTTT TACCACTGAT TTTTTATTCT ATCGCGATAC GTATAACAAA CTTATCGACA
GTTGGTTTAA TGCAATACAT TGAACCAAGC TTGCAGTTTG TTTTGGCTGT CATGTTTTTC
GGTGAACTGT TTGATGAAGT TAAAGCAGTG ACCTTTGCCT TTATTTGGGT GGGGCTGTTA
TTTACAATCT TTGAAAGTAT TGTCAAAGGG CATAAGCGTA AAAAGCTGGC CAATCATCCT
TTATAG
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| Protein sequence | MNNTRYGTFM AAFSFVIWGL LPIYYRYLPN ASMDELLAWR IIGSVPVGFL IVLGITRRGP
SWKEIWCDKK SLWYTFVASS LMCISWSAFT WALTHHRVID ASLGFFIGPL VSVALGVFIL
GDKLSKGKLI AIVLATIGVM YQVIHYGQLP VIALTMGLFF ALYGLYKKKI TYDWSTTLFV
EALLLTPVAV AYLFYKQWTV GELASGVDIT TLLLYFGSAP ITLLPLIFYS IAIRITNLST
VGLMQYIEPS LQFVLAVMFF GELFDEVKAV TFAFIWVGLL FTIFESIVKG HKRKKLANHP
L
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