| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000123 |
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| Symbol | |
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| ID | 8558428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 137854 |
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| End bp | 139092 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646407788 |
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| Product | GGDEF domain protein |
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| Protein accession | YP_003287276 |
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| Protein GI | 262395423 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.608204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCAT CATCAATGAC TTCATCAGGC TTTCGATTCC TTTTCCCATT TATGTTGCTG
GGATTAGTGA GTTCGAGCAT GAACAACATC ATTCAGATGA CTCAGTCAAA CTGGGGTATT
GCCGCAAATT TGCCGTACAT ACTGTTAGGC TGTGCACTGC TCCTTTGCTA TTCATTTAAG
CAAGGTCGGG AGTCAATGGT GTGCTTAGCG ACGTTACTGG CCTATTTCGT GATACAGCAC
AGGCTACAAG TTCCACTTCA AAGTGGTACA GCCTTACTTG AGCTGACCAT TTTAGCCACG
CTACTTCCTG TTTCTTTTCT TGCGGTATTT TTGTTTAGTA AAGATGGTTT CGACTCAAGA
GCCATGTTTA CTTACCTCTT GATGTTAACG ATGTTCGTTC TTTGGTCTTA CCTTACGTTA
GCGTATTACG TTGAAGGTGG GTTTGAACAA TGGACAAGCG GCATTTTATT TATCGTACCT
ACGGTTTCTA AACTGCCTTT TATTCTAGTT TTATATTGTG TGGGTATTGT CTGCTTCCTC
GGAATTCTTG TTTTAAAGAA GAATGAAATC ATCCATGCTA TGACCTACTC TGCAATGGTG
CTGGCGTCCG CGACGTTCAT TTTCTTTGAT GTGCAATACA TATCTAGCAC CATGTTTACC
CTAACGGGAT TGCTTATCAT TATTTATGCT GCCTCTGCCA GCCATCAATT GGCTTTCACA
GATAGCTTAA CGCGGGTCCC GAGTAGGCGC GCACTCGACC TTGACTTAAA ACACATGGGC
AAAAAGTTCA CGATCGCAAT GCTTGATGTT GACCACTTTA AAAAGTTTAA CGATACCTAC
GGTCACGATA CGGGTGATGA CGTATTAAAA ATGGTCGCTT CGCGTCTAAC TAAAACTCCC
GGTGGCGCAA AAGTATATCG ATTTGGCGGA GAAGAATTTA CCATCGTCTT TAAAGGCAAG
TACGCAGATG AGTGTAAAGA GTTTTTAGAA GAAGCACGTA AATCCATCGC AGAGTATGAG
ATGATTTTAC GTGATGAAGA ATCCCGCCCA GATAACCATA AACAAGGCCA AAAAAAGCGT
GGTAACGACA GTTCGAGGAG AAAGTCAGTC TTTGTTACCG CAAGTTTCGG AGCGGCCGAC
AGCAAAAACG GTCAAGCACC TCAGGACGTG ATTAAGTTAG CGGACGAAGC GCTTTACAAA
GCGAAAAAAG CTGGACGCAA TTGCGTGAGG CTTCATTAA
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| Protein sequence | MSSSSMTSSG FRFLFPFMLL GLVSSSMNNI IQMTQSNWGI AANLPYILLG CALLLCYSFK
QGRESMVCLA TLLAYFVIQH RLQVPLQSGT ALLELTILAT LLPVSFLAVF LFSKDGFDSR
AMFTYLLMLT MFVLWSYLTL AYYVEGGFEQ WTSGILFIVP TVSKLPFILV LYCVGIVCFL
GILVLKKNEI IHAMTYSAMV LASATFIFFD VQYISSTMFT LTGLLIIIYA ASASHQLAFT
DSLTRVPSRR ALDLDLKHMG KKFTIAMLDV DHFKKFNDTY GHDTGDDVLK MVASRLTKTP
GGAKVYRFGG EEFTIVFKGK YADECKEFLE EARKSIAEYE MILRDEESRP DNHKQGQKKR
GNDSSRRKSV FVTASFGAAD SKNGQAPQDV IKLADEALYK AKKAGRNCVR LH
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