| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004423 |
|---|
| Symbol | |
|---|
| ID | 8558191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 3130541 |
|---|
| End bp | 3130843 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646407552 |
|---|
| Product | transcriptional activator HlyU |
|---|
| Protein accession | YP_003287046 |
|---|
| Protein GI | 262395192 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000188739 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAC AAGAAATGGA GCAGAACTCC GCAAAAGCCG TCGTGTTGCT CAAAGCGATG
GCAAACGAGA GACGCCTACA AATCCTTTGT ATGCTGCATA ACCAAGAGCT GTCCGTGGGA
GAGCTGTGTG CAAAGTTAGA GCTAAGCCAG TCGGCATTAT CTCAGCATCT TGCTTGGCTT
CGCCGTGATG AGCTAGTCAC GACAAGGAAA GAAGCACAAA CCGTGTACTA CACATTAAAG
AGTGATGAAG TGAAAGCGTT AATAAAAACA CTGCATAGTC TTTATTGTGC TGAAAGCGCT
TAG
|
|---|
| Protein sequence | MNLQEMEQNS AKAVVLLKAM ANERRLQILC MLHNQELSVG ELCAKLELSQ SALSQHLAWL
RRDELVTTRK EAQTVYYTLK SDEVKALIKT LHSLYCAESA
|
|---|
| |