Gene VEA_004384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004384 
Symbol 
ID8558145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3081939 
End bp3083147 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content47% 
IMG OID646407506 
Productphosphate regulon sensor protein phoR 
Protein accessionYP_003287007 
Protein GI262395153 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTGGT TGCTTTTGGC AGCTACGGCA TTGCAGCTTG TGTGGCATTT GCATAACCAA 
GTACGTTTAT CTTCTTGGTT ATGGGATGAA AAGCGCCTCA CGCCACCGTC TGGTAGCGGT
AACTGGGAAT CTTTGTTCAA TGGCTTGTAT CGCTTACAGC AGCGCCAACG TCGTAAACGC
AAAGAGCTTA CTAATCTCAT TCGCCGATTC AGAAATGGTG CGGAATCGTT ACCCGATGCC
GTCGTGGTGT TCCGTGCTGA AGGCAATATC GTTTGGTGTA ACAAACTGGC TCAACACTTA
TTGGGTTTCC ATTGGCCGGA AGACTCTGGT CAACCTATCT CCAACCTCAT TCGTACGCCT
GATTTTATCA AGTACCTCAA CAAGAAAGAC TTCTCTGAGC CATTGGAAAT GCGCTCACCA
CTCAATGTCG AACGCATGCT AGAACTACGT ATCGTACCGT ATACCGAAGG TGAACATTTG
ATGGTGGTGC GTGATGTTAG CCAGTTAAAA CAACTTGAGG GAATGCGCCG CAACTTCTTT
GCTAACGTTT CTCATGAACT TCGTACACCA ATGACGGTGC TGCAAGGTTA TTTGGAGATG
ACAGAAGATC CTGACATGGT TGTGGGCCCA ATGTGGAGCA AAGCGCATGG TGTTATGACG
GAGCAGCTCA ACCGCATGAA CAGTTTGGTG AACCAACTAC TGACGCTATC TAAAATTGAA
GCGGCACCTA TGCATGAGCT TGAAGATGTC GTGAATGTAC CTGCGATGCT AGAAGTACTA
GAAAAAGAGG CGGTCAGCCT TAGTGGGGAC AACCAACATA AATTGAAATT TGATGTTGAT
GCTAGCCTAC GCGTACTGGG CGATGATGAC CAGTTACGTA GTGCTATCTC TAACCTCGTT
TATAATGCTG TCAAATACAC ACCGCCTGGC GCGAACATTA ATGTTCGTTG GTTCCAGACA
TCTCAAGGCG CATGCTTAGA GGTGGAGGAT AGTGGTGATG GTATAGAGCC TCAGCACCTC
CATCGACTTA CTGAGCGTTT TTATCGCGTC GATAAAGCAA GATCACGCGA TACCGGAGGG
AGTGGGTTAG GGTTGGCTAT TGTGAAACAT GCGCTGAGCC ACCATGATGC TCATTTGGAA
ATTCACAGTG AAGTGGGCGT GGGCAGTAAG TTTTCTTTTG TATTGCCTGA ACGTTTGGTG
GTGAAATAA
 
Protein sequence
MPWLLLAATA LQLVWHLHNQ VRLSSWLWDE KRLTPPSGSG NWESLFNGLY RLQQRQRRKR 
KELTNLIRRF RNGAESLPDA VVVFRAEGNI VWCNKLAQHL LGFHWPEDSG QPISNLIRTP
DFIKYLNKKD FSEPLEMRSP LNVERMLELR IVPYTEGEHL MVVRDVSQLK QLEGMRRNFF
ANVSHELRTP MTVLQGYLEM TEDPDMVVGP MWSKAHGVMT EQLNRMNSLV NQLLTLSKIE
AAPMHELEDV VNVPAMLEVL EKEAVSLSGD NQHKLKFDVD ASLRVLGDDD QLRSAISNLV
YNAVKYTPPG ANINVRWFQT SQGACLEVED SGDGIEPQHL HRLTERFYRV DKARSRDTGG
SGLGLAIVKH ALSHHDAHLE IHSEVGVGSK FSFVLPERLV VK