| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004336 |
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| Symbol | |
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| ID | 8558097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3025541 |
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| End bp | 3026311 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407458 |
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| Product | conjugative transfer protein TrbJ |
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| Protein accession | YP_003286959 |
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| Protein GI | 262395105 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACG TACGTATTTT AGCGGCTAAA ATAACTACGG CCGCTATTTC ATTAGCATTT
ATCTCTCCCA TACCGGTAGT AGCAGGGATT CCGGTTGTTG ATGGAACGAA CCTGACACAA
AATATTATGT CAGCAATGGA GTCTGTCACT CAAACAGCCA AGCAGATCCA ACAGTACCAA
ACTCAGTTGC AGCAATATGA AAACCAACTG CAAAACACGA TGGCACCAGC AGCTTACATT
TGGGACCAGG CACAATCGAC GATCGATGAT TTGACTCATG CCACCAACAC GCTTGCCTAT
TATCAAAACC AGCTTGGTAG CCTTGATGCT TACATCAGCA AGTTCCAGGA TGTGGCCTAC
TACCGCAGTT CACCTTGCTT TAACGGTTCT GGAGGGTGTA CGCCAGCAGA ACAAGCCGCG
ATGGAAGAAA ACCGTCGTTT AGCGTCTGAA TCCCAGAAAA CGGCAAACGA TGCTCTATTT
GAGAGCTTGA AGTTACAGCA TGAAAACTTA CAGGCCGACG CTCGTCAGCT GCACCGCTTA
CAGTCTGCAG CTCAGGGAGC TGATGGTCAG TTAGCTGCTA TTGGCTATGC TAACCAACTC
GCCAGCAATC AGGCCAACCA ACTCCTTCAA ATCCGTAGCT TATTGATTGC TCAGCAGAAT
GCTGAAGCCG CTAGGCTGGC GTCAGAGAGT GATGCACATG CCAGGGGAGA GGCTAGAGAA
AAACAGTTAC GCTCCTGGGA ATTTCAGCCA AGTCCAATCG ATGATTTTTA A
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| Protein sequence | MNNVRILAAK ITTAAISLAF ISPIPVVAGI PVVDGTNLTQ NIMSAMESVT QTAKQIQQYQ
TQLQQYENQL QNTMAPAAYI WDQAQSTIDD LTHATNTLAY YQNQLGSLDA YISKFQDVAY
YRSSPCFNGS GGCTPAEQAA MEENRRLASE SQKTANDALF ESLKLQHENL QADARQLHRL
QSAAQGADGQ LAAIGYANQL ASNQANQLLQ IRSLLIAQQN AEAARLASES DAHARGEARE
KQLRSWEFQP SPIDDF
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