| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004316 |
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| Symbol | |
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| ID | 8558077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2999811 |
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| End bp | 3000692 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407438 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_003286939 |
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| Protein GI | 262395085 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.610995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAG GCAGTGAGTA CCCTTCTATC CGAGCATTAA GGACGTTTGT CGCGGTTGCA
AATTACCTCA GCTTCTCAAA AGCGGCGGAT GCCCTATGCA TTACACAAAG TGCAGTAAGC
AAACAAATTG CCGCGCTTGA ACAACTAGTG GGTTTACCTT TAATACAAAG AGGCTCGAAT
GGTATTGAGT TAACTGAGGA AGGAAAACGC TACCTACCGC AAGTCACAGA AGCACTAGAA
CTTATTCAGA ATGCAACCGC CAACTTAATA CAATCAGATT CAAAGCAAGA ATTGCTCACC
GTGGATGTTA CTCCTTCTTT CGCTAGCCTT TGGTTGGTAC CTCATATTGA TGACTTCCAC
CAGCGACATC CCAATATCCG TGTAAGAATC TGTACCGGAG ATGGGAACGT AAAAGGTTCA
AGCGGTGAAA GCGACTTGCA TATTCGTTGT CTTCCATTGT CCACGCATTA TGAATACAGC
CACTTACTAT GCGAAGAAAT TCTACTATTG GTCGGTTGTA CTAACGCTCC TGCACTCAAG
AATGTGCACG CTGTTAGCGA CTATCCGCTG ATACCTCAAA TCACTCGTCC TCAGTTGTGG
GAGCAATTTA AGGCTGCGCA TGCAGTAGAA TCAACCGTTA CCTATCACTC TGTAGGCTTT
GAACATTTTT ACCTAGCTTA CGAAGCCGTC AAAATGGGAA AAGGACTCGC CTTACTTCCT
GATTTTATGG CGCAGAATTC TATTTTAAGA GGGGATATCC AACGTATTCT TAACCTATCT
TTACAGAGTG GTTATGGTTA TTACGTGATG ATCCCAAATT ATCGCCTATC GGCTAAGAAA
GTGGCGGCGT TTTACGAATG GTTGAAGAGC AAACTAAGCT AA
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| Protein sequence | MLKGSEYPSI RALRTFVAVA NYLSFSKAAD ALCITQSAVS KQIAALEQLV GLPLIQRGSN
GIELTEEGKR YLPQVTEALE LIQNATANLI QSDSKQELLT VDVTPSFASL WLVPHIDDFH
QRHPNIRVRI CTGDGNVKGS SGESDLHIRC LPLSTHYEYS HLLCEEILLL VGCTNAPALK
NVHAVSDYPL IPQITRPQLW EQFKAAHAVE STVTYHSVGF EHFYLAYEAV KMGKGLALLP
DFMAQNSILR GDIQRILNLS LQSGYGYYVM IPNYRLSAKK VAAFYEWLKS KLS
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