| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004281 |
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| Symbol | |
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| ID | 8558042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2964299 |
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| End bp | 2965876 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407403 |
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| Product | transglycosylase Slt family |
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| Protein accession | YP_003286904 |
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| Protein GI | 262395050 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAA GCCAGCTCAA CCGACTCAAG CGCAGCGCCC TAATTTTTGT TTCTGTGCTA
CTACTCTCTG CCTGCCAGAT TGAGTCGGAA CCCAAAAGTG AATTCGAAAA AATTCAGGAA
CGTGGCGTGC TTCGTGTTGG CACGCTAAAC AATCAGCTTT CCTATTATAT TGGTCCCGAT
GGTCCCGCTG GGTTGGATTA CGAATTGGCG CGTCAGTTTG CGGAGCAGCT CGGCGTCAAG
CTCGAGATTA AACCTGCCTT TCGCCAAGCC GAGCTTTTTC CTGCTCTTAA GAAAGGAGAT
ATTGATCTCA TCGCTACGGG CTTAAATCAA ACGTCACAAG CGGTAAAACG CTTTAGACCG
GGCCCTGCTT ATTATTATGT AAGCCAACAA GTTGTGTATA AAAAGGGGCA ACTTCGACCA
CGTGATATCG AACAGCTGAT TGAATACCAA GCATCGAAAG ACAGCGAATC AGACGAAGAT
ACAAATGCTG GCGCGCAAAC ATTAAAGATC GTCGAACAAT CGCAATATGT TCCGACCCTA
ACCGCATTAA AGAAGCAATA CCCAGAGCTG CAGTTTGAAA TTGTTGGCGA TGCTGACACG
AGAGACTTAC TTAAATATGT ATCCACTGGT GAGTTGCGTT TTACTGTGAC TGACTCTGTG
GAGCTTTCCC TAGCTCAGCG CCTTTACCCC GATCTTGCGC TCGCGTTTGA ACTTACAGAA
GATCAACCAG TATCGTGGTT TACTCGACGC TCTGAAGACG AAAGTTTGTA TGCGATGCTG
ATAGAGTTTT TCGGTAACAT TAAACAATCA GGAGAACTGT CCACTCTCGA AGAGAAGTAC
ATTGGTCATA TTGAAGCATT TGACTACGTT GATACTCGCG CATTCATTCG AGCTCTGGAT
GACAAATTGC CTAAGTGGGC ACCTTTATTC CAAAAGTACA GCGAAGAGTT CGACTGGCGA
TTAATTGCAG CATTGGCGTA TCAAGAATCA CACTGGAAGC CAGCGGCAAA ATCGCCAACA
GGTGTTAGAG GGATGATGAT GCTTACTCTG CCAACAGCGA AAAGCGTCGG GGTAACAAAC
CGTTTAGACC CTGAGCAATC TGTTCGTGGT GGTGTCGAGT ACTTACGTCG CATTGTAGGT
CGCGTGCCTG ATAGCATCAA CGAGCATGAA AAAATATGGT TTGCCCTGGC TTCATACAAC
ATTGGCTACG GCCACATGAT GGACGCACGG CGACTTACTA AAGCGCAAGG TGGCGATCCA
AACGCTTGGG CAGATGTAAA AGACAGATTG CCTTTACTGC GTCAGAAGCG TTACTACAGT
CAAACTCGCT ATGGGTACGC CAGAGGTGAT GAAGCGCGTA ATTACGTAGA AAATATTCGA
CGTTATTATC AATCCATCAT TGGTCATGTC AGCCAAAGAC CAGCGATTGA TGAGAATAGC
GATGACTTGC AAGTTATCCC GCCGCTCAAC CCTGACATTT TGATATCAGG AGCAGTAGAG
ACCGTTGTAG AGCAAATATC TGGCGCTTCT GACGTCACGG TTGAAGAAGA CACCGAACAA
GAAAGCCTTG AAGAATAG
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| Protein sequence | MQISQLNRLK RSALIFVSVL LLSACQIESE PKSEFEKIQE RGVLRVGTLN NQLSYYIGPD
GPAGLDYELA RQFAEQLGVK LEIKPAFRQA ELFPALKKGD IDLIATGLNQ TSQAVKRFRP
GPAYYYVSQQ VVYKKGQLRP RDIEQLIEYQ ASKDSESDED TNAGAQTLKI VEQSQYVPTL
TALKKQYPEL QFEIVGDADT RDLLKYVSTG ELRFTVTDSV ELSLAQRLYP DLALAFELTE
DQPVSWFTRR SEDESLYAML IEFFGNIKQS GELSTLEEKY IGHIEAFDYV DTRAFIRALD
DKLPKWAPLF QKYSEEFDWR LIAALAYQES HWKPAAKSPT GVRGMMMLTL PTAKSVGVTN
RLDPEQSVRG GVEYLRRIVG RVPDSINEHE KIWFALASYN IGYGHMMDAR RLTKAQGGDP
NAWADVKDRL PLLRQKRYYS QTRYGYARGD EARNYVENIR RYYQSIIGHV SQRPAIDENS
DDLQVIPPLN PDILISGAVE TVVEQISGAS DVTVEEDTEQ ESLEE
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