| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004236 |
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| Symbol | |
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| ID | 8557997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2915173 |
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| End bp | 2916120 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407358 |
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| Product | trehalose operon transcriptional repressor |
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| Protein accession | YP_003286859 |
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| Protein GI | 262395005 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA AACTCACTAT TCTTGATATC GCGAAATTGG CAGGCGTTGG CAAATCAACA
GTAAGCCGTG TGCTTACCAA CGATCCAAAA GTGAAACCTC AAACGCGAGA GAAAGTAGAG
CAAATCATTC GTGAATCTGG TTATGTACCG TCCAAATCTG CGCAATCAAT GCGTGGCGGT
AGCCAAAAAG TCATTGGTGT TATCATCTCC CGTCTAGACT CACCATCCGA AAATCGTGCT
GTTGGTACAA TGCTCAATGC ATTGTATTCC GCTGGTTATG ATGCGGTGAT CATGGAGAGT
CAGTTTGACC GAGACAAAAC CAATGAGCAC TTGAGTGTGC TTAAGCGTCG CAATGTGGAT
GGCGTGATTG TATTTGGGTT TACTGGATGC GATGAGCAAG CCTTAGCCGA GTGGGGCAAT
CGCATTGTGG TGATTGCGAT GGATACCGAT AACGTCTCTT CCATCAATTA TGATAACCAA
GGCGTGATAG ACATGGCTTT GTCTCACCTT GAGCAGCAAT CTTTATCTCG CATTGCTTAT
ATTGGTGTTG ATCCCGAAGA TAAAACCACA GGCTTGGCTC GTTTAAATGC TTACAAAGCT
TGGTGTCAGC GCAAGCAACT TACGCCTTGC TTCCAAACCG GTAAGCTTAG CCATGAAAGT
GCTTATCAGT TGGTGGACCA CGTTCTGAAA GCAGACACGC AAGCTATTGT GTGTGCCAGC
GATACCATTG CATTGGGCGT AATCAAGCGT CTTCAAGAGT TAGGTCGTGA AGACGTGGTC
GTGACAGGCG TGGGTGGTAA CGAGTTGCTT TCTTTCCTTT TCCCTAAAGT ATTTAGTGTC
GATCCTGGTT ATACCCTTGC GGGTGAAAAG TCCGCTAAAA TGCTGATTAA TCAATTAAAT
GGCGATGAAG AAGTCGTTCA CTTCACTCAA CAACCTATTT GCCGCTAA
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| Protein sequence | MSKKLTILDI AKLAGVGKST VSRVLTNDPK VKPQTREKVE QIIRESGYVP SKSAQSMRGG
SQKVIGVIIS RLDSPSENRA VGTMLNALYS AGYDAVIMES QFDRDKTNEH LSVLKRRNVD
GVIVFGFTGC DEQALAEWGN RIVVIAMDTD NVSSINYDNQ GVIDMALSHL EQQSLSRIAY
IGVDPEDKTT GLARLNAYKA WCQRKQLTPC FQTGKLSHES AYQLVDHVLK ADTQAIVCAS
DTIALGVIKR LQELGREDVV VTGVGGNELL SFLFPKVFSV DPGYTLAGEK SAKMLINQLN
GDEEVVHFTQ QPICR
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