| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004048 |
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| Symbol | |
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| ID | 8557787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2707678 |
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| End bp | 2709039 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407149 |
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| Product | TRAP-type C4-dicarboxylate transport system large permease component |
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| Protein accession | YP_003286673 |
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| Protein GI | 262394819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCT TATTTCTATT TTTGATGGTG ATTGGTTTCA TGCTCGTCGG CGTGCCAATC
GCAGTTTCTC TTGGTCTTTC CAGTATTCTT TTCCTTTTGA TTCATTCGGA TGCGTCTTTG
GCGTCTGTTG CTCAAACGTT GTTTAATGCA TTTGCTGGAC ACTACACTCT ATTAGCAATT
CCATTCTTCA TTTTAGCTTC AAGCTTTATG TCGACAGGTG GTGTAGCGAA ACGGATCATT
CGTTTCGCGA TTGCGATTGT AGGCTGGTTC CGTGGTGGTT TAGCGATGGC TTCGGTTGTC
GCGTGTATGA TGTTTGCCGC GCTGTCAGGT TCATCTCCAG CAACGGTTGT TGCCATAGGT
AGCATCGTTA TCGCAGGTAT GATCAAAAAC GGTTACTCAA AAGAGTTTGC GGCCGGCGTA
ATTTGTAACG CAGGTACGCT AGGGATTTTG ATTCCGCCGT CTATCGTTAT GGTAGTTTAC
GCTGCTGCGA CTGATGTATC AGTTGGACGT ATGTTCCTCG GTGGTGTGAT ACCGGGTTTG
TTGGCTGGCG TCATGCTGAT GATAGCGATC TATATTGCTG CCCGTATTAA GAACCTGCCA
AAACAACCAT TTGTCGGTTG GAAAGAGACG TTTGATGCAG CTAAGGATGC AAGCTGGGGC
TTGTTGCTGG TGGTGATCAT TCTCGGTGGT ATTTATGGCG GTATTTTCAC CCCAACAGAA
GCCGCTGCAG TTGCTGCTGT GTACTCGTTC TTTATTGCCA ACTTTGTATA CAAAGACATG
GGGCCATTTG CAGACAAGAA AAACACTAAA CCTGCGTTAG TCAAAATTTT TCATACCTTC
GTTCATAAAG ACACCAAACA CACGCTGTAT GAAGCGGGTA AACTCACCAT CATGCTGCTT
TTCATTATTG CCAATGCGTT AATTTTGAAG CACGTTCTCA CGGAAGAGCG TATCCCGCAA
ATGATCACAG AGTCAATGAT GTCAGCTGGT TTAGGACCAA TCACCTTCTT GATTGTAGTG
AACGTATTGC TGTTGATTGG TGGTCAGTTT ATGGAGCCAT CAGGCTTATT GATCATTGTT
GCACCACTGG TGTTCCCAAT TGCGATAGCA CTGGGGATCG ACCCAATTCA CTTAGGTATT
ATGATGGTGG TGAATATGGA GATAGGTATG ATAACACCAC CTGTTGGGCT TAACTTGTTT
GTTACTGCAG GTGTCGCCAA AATGTCGATG ATGAATGTAG TAAAAGCCGC ACTGCCATGG
GTGGCGGTGA TGTTCCTATT CCTTATTATT GTAACGTACG TGCCATGGGT ATCGACTTGG
TTACCAACCA CCTTGATGGG GCCAGAAATC ATTACTAAGT AA
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| Protein sequence | MDILFLFLMV IGFMLVGVPI AVSLGLSSIL FLLIHSDASL ASVAQTLFNA FAGHYTLLAI
PFFILASSFM STGGVAKRII RFAIAIVGWF RGGLAMASVV ACMMFAALSG SSPATVVAIG
SIVIAGMIKN GYSKEFAAGV ICNAGTLGIL IPPSIVMVVY AAATDVSVGR MFLGGVIPGL
LAGVMLMIAI YIAARIKNLP KQPFVGWKET FDAAKDASWG LLLVVIILGG IYGGIFTPTE
AAAVAAVYSF FIANFVYKDM GPFADKKNTK PALVKIFHTF VHKDTKHTLY EAGKLTIMLL
FIIANALILK HVLTEERIPQ MITESMMSAG LGPITFLIVV NVLLLIGGQF MEPSGLLIIV
APLVFPIAIA LGIDPIHLGI MMVVNMEIGM ITPPVGLNLF VTAGVAKMSM MNVVKAALPW
VAVMFLFLII VTYVPWVSTW LPTTLMGPEI ITK
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