Gene VEA_003964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003964 
Symbol 
ID8557700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2605732 
End bp2606517 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content47% 
IMG OID646407062 
Producthypothetical protein 
Protein accessionYP_003286589 
Protein GI262394735 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.224293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGA TTGAGCCAAC TATGCTGTTG GTGTTGGCGC TTGTCGCTTT TGTCGCTGGA 
TTTATTGATG CAGTTGCCGG TGGTGGTGGC ATGCTAACCG TACCTGCTCT ACTATCGTTG
GGCTTGCCGC CCCATATTGC ACTAGGCACC AATAAACTTG CGGCTACCTT TGCCTCTTCT
ACTGCGGCAT TTACGTACTA CAAGAAACGT TTATTCAAGC CTCAATGTTG GGGAAGAGCA
TTTGTTGCGA CGCTTGTCGG AGCAACATTA GGTACCCTAC TTGTGGACGC GATTAGCACG
GATTGGCTAG AAAAAGGGTT ACCTCTTGTT ATTTTAGCGG CGGCGTTATA CACCGTCTTC
CATAAAACAC CGCACTCTCC TCATCAAAGT CCAATTCCCG AGCCTTGTCC AAAACTTCAT
AGAAAACAGT ACATGCAAGG ATTATCCATA GGGTTCTATG ACGGGCTCGC AGGGCCTGGT
ACTGGGGCTT TTTGGACGGT AAGTTCAATG GCTCTGTATC GGCTGAATAT CTTGCTCGCC
TCTGGCTTAG CAAAAGCAAT GAACTTTACC AGCAACTTTA CCTCTTTGAT CACGTTTGCA
GTCCTCGGTC ATATCAACTG GGTGCTAGGC TTAACAATGG GGGTATGTTT AATGGCTGGC
GCTTTTGTTG GCGCACATTC CGCCATTCGG TTTGGTTCTA AATTCATTCG CCCTGTATTT
GTTACTGTCG TCAGTATACT GGCCATAAAA TTGGCTTATG ACGCATGGTT TGTAGGTTTG
TCATGA
 
Protein sequence
MEMIEPTMLL VLALVAFVAG FIDAVAGGGG MLTVPALLSL GLPPHIALGT NKLAATFASS 
TAAFTYYKKR LFKPQCWGRA FVATLVGATL GTLLVDAIST DWLEKGLPLV ILAAALYTVF
HKTPHSPHQS PIPEPCPKLH RKQYMQGLSI GFYDGLAGPG TGAFWTVSSM ALYRLNILLA
SGLAKAMNFT SNFTSLITFA VLGHINWVLG LTMGVCLMAG AFVGAHSAIR FGSKFIRPVF
VTVVSILAIK LAYDAWFVGL S