Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003964 |
Symbol | |
ID | 8557700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2605732 |
End bp | 2606517 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407062 |
Product | hypothetical protein |
Protein accession | YP_003286589 |
Protein GI | 262394735 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.224293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGA TTGAGCCAAC TATGCTGTTG GTGTTGGCGC TTGTCGCTTT TGTCGCTGGA TTTATTGATG CAGTTGCCGG TGGTGGTGGC ATGCTAACCG TACCTGCTCT ACTATCGTTG GGCTTGCCGC CCCATATTGC ACTAGGCACC AATAAACTTG CGGCTACCTT TGCCTCTTCT ACTGCGGCAT TTACGTACTA CAAGAAACGT TTATTCAAGC CTCAATGTTG GGGAAGAGCA TTTGTTGCGA CGCTTGTCGG AGCAACATTA GGTACCCTAC TTGTGGACGC GATTAGCACG GATTGGCTAG AAAAAGGGTT ACCTCTTGTT ATTTTAGCGG CGGCGTTATA CACCGTCTTC CATAAAACAC CGCACTCTCC TCATCAAAGT CCAATTCCCG AGCCTTGTCC AAAACTTCAT AGAAAACAGT ACATGCAAGG ATTATCCATA GGGTTCTATG ACGGGCTCGC AGGGCCTGGT ACTGGGGCTT TTTGGACGGT AAGTTCAATG GCTCTGTATC GGCTGAATAT CTTGCTCGCC TCTGGCTTAG CAAAAGCAAT GAACTTTACC AGCAACTTTA CCTCTTTGAT CACGTTTGCA GTCCTCGGTC ATATCAACTG GGTGCTAGGC TTAACAATGG GGGTATGTTT AATGGCTGGC GCTTTTGTTG GCGCACATTC CGCCATTCGG TTTGGTTCTA AATTCATTCG CCCTGTATTT GTTACTGTCG TCAGTATACT GGCCATAAAA TTGGCTTATG ACGCATGGTT TGTAGGTTTG TCATGA
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Protein sequence | MEMIEPTMLL VLALVAFVAG FIDAVAGGGG MLTVPALLSL GLPPHIALGT NKLAATFASS TAAFTYYKKR LFKPQCWGRA FVATLVGATL GTLLVDAIST DWLEKGLPLV ILAAALYTVF HKTPHSPHQS PIPEPCPKLH RKQYMQGLSI GFYDGLAGPG TGAFWTVSSM ALYRLNILLA SGLAKAMNFT SNFTSLITFA VLGHINWVLG LTMGVCLMAG AFVGAHSAIR FGSKFIRPVF VTVVSILAIK LAYDAWFVGL S
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