Gene VEA_003943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003943 
Symbol 
ID8557679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2581706 
End bp2582392 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID646407041 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003286568 
Protein GI262394714 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA AACTGATATT AGGCCTAATC CTGGTCGCGA TCATTATCTT TTTAGGCGTT 
AACTTTAGTC AGTATTTAAC GTTGGAAAAT GCAAAAGCAC AACAAGAAGC GCTGACCACA 
TACATCGATC AGAACTTTGT TTTTTCGGTA GCTATTTACT TTTTTGCCTA CATTGCAATT 
ACCGCTTTTT CTATTCCTGG GGCAGCTGTG GTTACATTAC TTGGTGCGGC TCTATTTGGT 
TTTTGGACGA GCTTATTACT GGTTTCTTTC GCCAGTACTA TGGGTGCAAC ACTAGCATTT 
TTAAGCAGCC GATATTTGCT GCGTGACTGG GTACAAAACA AGTTTGGCAA TAAGTTAATC 
GCAATTAACC AAGGTGTCGA AAAAGACGGT GCATTTTATC TATTTTCCTT GCGTCTCATT 
CCGGTATTCC CTTTCTTTCT TATCAACTTG TTGATGGGCT TAACGCCAAT GTCTGTAGGT 
CGATTTTACC TTACTAGCCA AGTAGGTATG TTGCCAGGCA CTGCAGTTTA CTTAAACGCC 
GGTACTCAGT TAGCAACAAT TGAAAGCCTG TCAGGCATTA TTTCACCTGC GGTATTGGCC 
TCTTTTGCGT TACTGGGGCT GTTTCCAATC ATCACTAAAT GGGTTATGAA TAAAGTAAGG 
CCAACACCGA GTCAGCAAAA CTCATAA
 
Protein sequence
MNKKLILGLI LVAIIIFLGV NFSQYLTLEN AKAQQEALTT YIDQNFVFSV AIYFFAYIAI 
TAFSIPGAAV VTLLGAALFG FWTSLLLVSF ASTMGATLAF LSSRYLLRDW VQNKFGNKLI 
AINQGVEKDG AFYLFSLRLI PVFPFFLINL LMGLTPMSVG RFYLTSQVGM LPGTAVYLNA 
GTQLATIESL SGIISPAVLA SFALLGLFPI ITKWVMNKVR PTPSQQNS