Gene VEA_003905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003905 
Symbol 
ID8557641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2542388 
End bp2542999 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content45% 
IMG OID646407003 
Producthypothetical protein 
Protein accessionYP_003286530 
Protein GI262394676 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.968515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA TCAACCAGCC CATTAACAAA TGGTATTCTA TTTTGAAACT ACAAGACATC 
CTTTCTCTCC CAGAACTTGA CGGTAAACTA CTAAACCTAG CAAAAACTCA AGGCTTTGTA 
ACAGCGATGG CTGCAGCGCC AAACGTATTA ATGCCTCAAG AGTGGTTGCC ATTCTTATGG 
GGTGGTGAAG AAACTGCGCC ATTTACTGAC GGTGAGCAAT TAGAGCAATA CATTGATGAG 
ATTGTACAAA TGTGGAACCA AACTCGTCCT GCTCTTCTAG AAGGATCTTG GCAGTGGCCT 
GAAGGATGCG CGTTAGATGA ACAAGATATT GTAACAAGCC AGACCCGTGA TTTCTGTGAA 
GGTGTATTAC AAGGTTGGCA ACTTGCTCGT GATGACTGGG AAACGCTAAT GCCAGAGGAC 
AGCGAAGATA ATGCTCTGCT CGGCGGTGTT TTGCTTTCTC TTACGATGCT TTACGATCCA 
GAAACGACCA TTGAAACGTT GGCAGAACAA GGCATGGAAG GCTTAGAACA GTTTGAAGAG 
ATCTTCAATG CCATGCCAGT GATGCTATGT GGTCTTACTC AGCGCGGTGT TGCATTAGCT 
GAAGAACAAT AA
 
Protein sequence
MSAINQPINK WYSILKLQDI LSLPELDGKL LNLAKTQGFV TAMAAAPNVL MPQEWLPFLW 
GGEETAPFTD GEQLEQYIDE IVQMWNQTRP ALLEGSWQWP EGCALDEQDI VTSQTRDFCE 
GVLQGWQLAR DDWETLMPED SEDNALLGGV LLSLTMLYDP ETTIETLAEQ GMEGLEQFEE 
IFNAMPVMLC GLTQRGVALA EEQ