| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003897 |
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| Symbol | |
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| ID | 8557632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2532043 |
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| End bp | 2533974 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646406994 |
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| Product | hypothetical protein |
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| Protein accession | YP_003286522 |
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| Protein GI | 262394668 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTG GATTAGATGT TCAGCTCACA GGAACAAAAG ACTTTAACGG TTTTTTGCTT
GAGAAGCCCC TGCGCTTGGA TGCGAGAATT ATGGTTTTAA CAGGAAGAAA CGGTTCAGGA
AAAACTAGAT TTATTGAAAG TGTTAGTAAT GGGTCTACTC AAATATCCAT TGATGGGTCA
CTCTTAGATA ATGCTAGTGT TTCGTATATA AAACAATCAG CTCTTAATCC AAACCTTGGA
AATGTTTATA ATCATTCAAA TAGTCAAAAT CGACTTACAG CTGCTTTGAG CTTTTATAAT
AGTGTTAAGC ATGACTTCGA TCTTCCTTTT GATAGAGGTA AATCTCAAGC ACATGACCGA
AGAAATGAAG GTAGTACTTT AAATTATGAG CAGCTTTACA ACCTTTGTTC TGCAATATCA
AAGAAAATGG ACAAACCTGC TTCGGAGCTT AGTCATGACG ATATAATACT AAATTATGAA
GAACCTTCTA ACAATATCCT TGGCGTTCAG AATATATCGA CTATCTTTAA TCAGTACATC
CAGAGGCAGC ACCTAAATAA GTACAATAAA TGGCTGAATA CAGTTGAAAA TGAAGATGTT
AAGTTCTTTT CAGATGTTGA GTTTATAGAT AAATTTGGGG ACAAACCATG GATTGTAATA
AATAAAATAC TTGACGAAAC TTTTGATGGT AAATTTAAGT TTAATGCCCC TGACGAAAAT
TCAAAAAGTT ACTCTTTTCA AGCTAGTTTG ATCAATACAG AAGACGGAAA AGACTCTGTT
CTATCAGTTC AGCAGCTTTC ATCAGGTGAA AAAACACTGC TATGGTTAGC ACTAACTTTG
TTTAATACTC AGTACTACGA GGTGGAGTTT ACAAAGGCAC CTAAGGTTTT GCTTATCGAT
GAGCCTGATG CTTTCCTACA CCCTAAAATG GTTGTGAAAA TGTATCAAGC GTTAGAGTCC
TTTAGCAAAA GTTTTGGTTC TACAGTTATT ATTAGTACGC ATTCACCAAC TACTGTAGCT
TTATCACCAA AAGATAGCGT GTTTCTAGTT GAAAATAATA ATATTAAACT CATTGAAAAA
GATGAAGGGA TAGCTGAGCT TTTAGATGGT GTAACACAAA TATCAATTAG TCCAGATAAT
AGACGTCAAG TTTTCGTTGA GAGTCAGTAT GATGCAGATG TATATCAAAG TATCTACTAT
AAATTAATGA ACTCCTCAAA GTTGATTGAC CCTAAAATAT CATTGAGCTT TGTTAGTTCA
GGTCCAAAAA TGCCAAGTCA GCAATTAATG GATAAGGCGA AGCAAATACT CAAAGTTACT
GATGAGAACC TGCTCAGTGA GTTTACCAAG TCAATTAATG GAATTGGCAA CTGTGTACAG
GTATTAGGTC AAGTTGAGGC ACTTCTTAAT AACGACAGTA AAACCGTTAG AGGTATTATT
GATTGGGACC TAAAGAATAG ACCTAAAAAG GGTATCTCCA TATTAGCTGA AGATTATGCT
TACTCTATTG AAAATATAAC GTTAGATCCT GTTTGTATAA TCTTACTCCT TCATGTGGAT
AAAAATTATA CTATGTCTGA TATATGTGGC TCAGAAGTCA ACTGGCATGA ATTTATTGAA
AATGACCAGC TTTTACAAGT TAGTATAGAT AGATTGATAT CTAAGGTACT CGGAAGAGAT
AGTAATAAAG ATGCAGTTCT AGCCTATACA TCAGGAGTAA AACTATATAC AGACAGGGAT
TATCTAAGAA TGAATGGTCA CGCTCTTGAG CGGAAAGTTA AAGAAAAATA TCCAGAACTA
AACGCATACT GCAAAAAAGG TAGAGATGGA GATCTGAAAT GTACCATCGT CAACAAGGCG
ATGATTACAC TTTCAAACTG TAAGTTTATT CCTGTTGAGT ACGAGAGAGT GATAGCAGAC
GTTCAAAAGT GA
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| Protein sequence | MELGLDVQLT GTKDFNGFLL EKPLRLDARI MVLTGRNGSG KTRFIESVSN GSTQISIDGS
LLDNASVSYI KQSALNPNLG NVYNHSNSQN RLTAALSFYN SVKHDFDLPF DRGKSQAHDR
RNEGSTLNYE QLYNLCSAIS KKMDKPASEL SHDDIILNYE EPSNNILGVQ NISTIFNQYI
QRQHLNKYNK WLNTVENEDV KFFSDVEFID KFGDKPWIVI NKILDETFDG KFKFNAPDEN
SKSYSFQASL INTEDGKDSV LSVQQLSSGE KTLLWLALTL FNTQYYEVEF TKAPKVLLID
EPDAFLHPKM VVKMYQALES FSKSFGSTVI ISTHSPTTVA LSPKDSVFLV ENNNIKLIEK
DEGIAELLDG VTQISISPDN RRQVFVESQY DADVYQSIYY KLMNSSKLID PKISLSFVSS
GPKMPSQQLM DKAKQILKVT DENLLSEFTK SINGIGNCVQ VLGQVEALLN NDSKTVRGII
DWDLKNRPKK GISILAEDYA YSIENITLDP VCIILLLHVD KNYTMSDICG SEVNWHEFIE
NDQLLQVSID RLISKVLGRD SNKDAVLAYT SGVKLYTDRD YLRMNGHALE RKVKEKYPEL
NAYCKKGRDG DLKCTIVNKA MITLSNCKFI PVEYERVIAD VQK
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