Gene VEA_003870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003870 
Symbol 
ID8557605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2499042 
End bp2500193 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content49% 
IMG OID646406967 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003286495 
Protein GI262394641 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.697906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCGT TTAAATCTCG TATCGAGTCC GCCCTTGCCG ATCGTAAAGC GCAGGGGCTG 
AATCGTTCGA TGAATGTGGT GTTTTCCGGC AACCAATCGA TTTTGGAATA CGAAGGCAGA 
CGCTACATCA ACTTCTCAAG TAATGATTAT TTAGGCTTGG CCAATGACCA AGCGCTCGTT 
CGTGCTTGGC AGCAAGGCTT GAGTGTATAC GGCAGTGGCA GTGGTGCATC TCCAATGGTC 
ACAGGTTTTA GTGCCGCGCA CAGCAATTTA GAAGCGGCAC TAACAGAATG GCTGAGTTAC 
GACAGAGCAA TTCTGTTTGG TTCTGGATTC AGTGCTAATC AAGCCTTGTT GTTCACCTTG 
TTAGAAAAAT CAGACGTACT CATTCAAGAC CGTTTGAACC ATGCCTCGTT GATGGAAGCG 
GGGGCGTTGT CACCAGCTAA GATGAAGCGC TTCAAGCACA ATGACATCGA GCACCTAAAG 
TCGCTGCTGA ATAGCGAAGA CAATCACTTA GTCGTGACTG AAGGGGTGTT TAGTATGGAC 
GGGGATTGTG CACCACTTGC TGATATAGCT GACGTCACCG GTAATCATGA TGCTTGGCTA 
GCTGTAGACG ACGCTCATGG TATCGGTGTT CTAGGGGAAT CTGGCGGTGG CTCATGTGAA 
TTAGCGGCGG TTAAGCCTGA GATACTGATC GTTACTTTCG GCAAAGCGTT TGGTATGTCT 
GGCGCGGCTA TTTTATGTGA CCACGCAACG GGGGACTTTT TAACTCAGTT TGCTCGTCAC 
CATGTGTATT CCACGGCGAT GCCTCCGGCA CAAGCCTATG CGCTCACGCA TGCTGTCTCG 
ATGGTTCAAG AGCAGTCTTG GCGACGTGAA AAGCTCACAG AGTTAAGTGA AGTGTATCGA 
GATAGCCTCA ACGACGTTGA GGGCTTTGTT GAGACTCAAA CTTCGATTAA GCCGTTTGTG 
ATTGGTGAAT CTGATTTGGC TTTGCGAGTA GCAGGTGCTT GTCGCCAAAA CGGTATTTGG 
GTTACTGCTA TTCGTCCTCC AACAGTTCCG AAAGGGACGT CTCGTCTTCG AATCACACTC 
ACTGCTAATC ACACTAACGA ACAAGTTAAA ACGCTTTCAA TGGCATTGAA GCAAGCATTA 
GGAACGCAGT AA
 
Protein sequence
MPAFKSRIES ALADRKAQGL NRSMNVVFSG NQSILEYEGR RYINFSSNDY LGLANDQALV 
RAWQQGLSVY GSGSGASPMV TGFSAAHSNL EAALTEWLSY DRAILFGSGF SANQALLFTL 
LEKSDVLIQD RLNHASLMEA GALSPAKMKR FKHNDIEHLK SLLNSEDNHL VVTEGVFSMD 
GDCAPLADIA DVTGNHDAWL AVDDAHGIGV LGESGGGSCE LAAVKPEILI VTFGKAFGMS 
GAAILCDHAT GDFLTQFARH HVYSTAMPPA QAYALTHAVS MVQEQSWRRE KLTELSEVYR 
DSLNDVEGFV ETQTSIKPFV IGESDLALRV AGACRQNGIW VTAIRPPTVP KGTSRLRITL 
TANHTNEQVK TLSMALKQAL GTQ