| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003847 |
|---|
| Symbol | |
|---|
| ID | 8557582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2476198 |
|---|
| End bp | 2477238 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646406944 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_003286472 |
|---|
| Protein GI | 262394618 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TAGCGCGTAA ACAAGTCCAA CAACTAACAC CTTATCTTTC GGCTCGCCGA
ATTGGTGGAA CAGGTGACGT ATGGCTGAAC GCCAACGAAT CGCCATTCAA CAATGAATAC
AAAACAGACT TTGCTCGTCT TAATCGTTAC AGCGAATGCC AGCCGAAAGA ACTGATTTCT
GCTTACGCCG CGTATGCTGG AGTGAAGCCA GAACAAACGC TGACTTCTCG CGGCGCAGAC
GAAGGTATTG AGTTATTGAT TCGTGCTTTC TGTGAACCGG GTGAAGACGC GATTTTATAC
TGCCCACCGA CTTACGGTAT GTACGCCATC AGTGCAGAAA CCATCGGTGT AGAGCGCAAA
ACGGTGCCGC TAATGTCAGA TTGGCAACTA GACCTTGCAG GCATCGAAGC GAATCTAGAT
AACGTAAAAC TGGTTTTCGT ATGCTCGCCA AACAACCCAA CGGGTAACTT AGTTAAGCGT
GACGATATTG TCTCTCTGCT TGAGATGACA AAAGACCGCG CAATCGTGGT CATGGACGAA
GCGTACATCG ATTTTTGTCC AGAAGCGTCA ACAGTAGATT TACTGGCAGA ATATCCAAAT
CTAGCGATTC TACGTACTCT GTCGAAAGCT TTCGCGCTTG CTGGTCTTCG TTGTGGATTT
ACGCTAGCAA ACGAAGAACT GATTAACGTC CTTCTTAAAG TGATCGCACC ATATCCAGTA
CCGGTTCCAG TTGCTGAAAT TGCTACTCAA GCGCTCTCTG AAGCAGGATT AGCGCGAGCG
AAGTTCCAAG TTCTCGACTT GAACGCAAAC CGAGCTTACT TACAAGTTGG TTTGTCGATG
ATTCCGGGTC TGGAGGTTTT TGAAGGGTGG GGTAACTACT TATTGGTGAA ATTCCCAGAT
GGCGATGCTC TTTTCAAAGC CGCTTGGGAT ACGGGCATTA TCCTGCGTAA CTCGCCAATT
GAGAACTGCG TGCGTATCAG TGTTGGTAAC CGCGACGAGT GTGAAAAGAC ACTGGGTTTC
ATTAGAAACT ACTATTCATA A
|
|---|
| Protein sequence | MEKLARKQVQ QLTPYLSARR IGGTGDVWLN ANESPFNNEY KTDFARLNRY SECQPKELIS
AYAAYAGVKP EQTLTSRGAD EGIELLIRAF CEPGEDAILY CPPTYGMYAI SAETIGVERK
TVPLMSDWQL DLAGIEANLD NVKLVFVCSP NNPTGNLVKR DDIVSLLEMT KDRAIVVMDE
AYIDFCPEAS TVDLLAEYPN LAILRTLSKA FALAGLRCGF TLANEELINV LLKVIAPYPV
PVPVAEIATQ ALSEAGLARA KFQVLDLNAN RAYLQVGLSM IPGLEVFEGW GNYLLVKFPD
GDALFKAAWD TGIILRNSPI ENCVRISVGN RDECEKTLGF IRNYYS
|
|---|
| |