| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003825 |
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| Symbol | |
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| ID | 8557560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2456402 |
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| End bp | 2458864 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406922 |
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| Product | trimethylamine-N-oxide reductase |
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| Protein accession | YP_003286450 |
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| Protein GI | 262394596 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTA CACGAAGAAG TTTTCTTAAA GGTGTAGCAA CCACAAGTGC AGCGTCAGTT
ATTGGTCCTA GCTTATTGGC GTCAGCCTCT GCCAATGCTG TTGAGACGAC AGGTACTTGG
AAAGTAACAG GTTCTCACTG GGGCGCGTTC CGCGCCCACA TCTACGCGGG TAAAGTTCAA
GAGATCAAAC CGCTAGAGCT AGACAAAAAC CCAACTGAAA TGCTAAACGG CATCAAGGGC
ATTATTTACA GCCCTTCACG TGTGCGTTAC CCAATGGTTC GTCTAGATTG GTTGAAGAAA
CATAAATATA GCGCGGATAC TCGCGGTAAC AACCGTTTCA TCCGCGTGAC TTGGGATGAA
GCGCTAGATT TGTTCTACCG TGAACTAGAA CGTATTCAAA AAGACTACGG TCCATGGGCG
CTACACGCAG GTCAAACGGG TTGGAACCAA ACAGGTTCAT TCAACAACTG TACCGCGCAC
ATGCAACGTG CAGTAGGTAT GCACGGCAAC TTCATCACGA AAGTAGGTGA CTACTCGACG
GGTGCAGGTC AAACCATCAT GCCTTACGTA CTTGGTTCAA CCGAAGTTTA CGCACAAGGT
ACGTCTTGGT CTGAAATCCT AGAGAACTCT GACAACATCG TTCTTTGGGC TAACGACCCA
GTGAAAAACC TTCAAGTAGG TTGGAACTGT GAAACACATG AGTCGTTCAA GTACCTAGCA
CAACTAAAAG AAAAAGTAGC GAAAGGTGAG ATCAACGTTC TATCTGTAGA TCCAGTGAAG
AACAAGACTC AGCGCTACTT AGAGAATGAT CACTTGTACA TTAACCCGCT GACAGACGTA
GCGTTCATGC TTGCTGTGGC GCACGTGCTG TACAACGAAG ACTTGTACGA TAAGAAGTTC
ATTGATACTT ACTGTCTAGG CTTTGAAGAA TTTATTCAAT ACGTTCAAGG TAAGACAAAA
GATAAAGTAG AGAAAACACC AGAGTGGGCT GCGACTATCT GTGGCGTGAA AGCGGACAAG
ATTCGCGAAT TCGCGCGTAT GCTAGTCAGT GGCCGTACAC AGATCCTGAT GGGTTGGTGT
ATCCAGCGTC AAGAGCACGG TGAGCAACCA TACTGGGCGG CGGCTGTGGT TGCTGCAATG
GTTGGTCAAA TCGGTTTACC TGGCGGTGGT ATCTCTTACG GTCACCACTA CTCAAGTATC
GGTGTACCTT CAACTGGTTT CGCGGGCCCT GGTGGTTTCC CTCGTAACCT TGACCAAGGT
ATGAAGCCGA AGTGGGACAA CAACGACTTT AACGGTTACA GCCGTACTAT CCCAGTTGCA
CGTTGGATCG ACTGTCTGCT TGAGCCAGGC AAAGAGATCA ACTACAACGG CGGTAAAGTG
AAACTGCCAG ACTTCAAGAT GATGGTGATC TCGGGTTGTA ACCCATGGCA CCACCATCAA
GATCGTAACC GCATGAAGAA AGCGTTCCGC AAACTTCAAA CGGTTGTAAC GATCGAGTTT
GCTTGGACTG CAACATGTCG TTTCTCGGAT ATCGTTCTAC CTGCGTGTAC GCAATGGGAA
CGTAACGACA TCGACGTATA CGGTTCATAC TCGAACAAAG GTCTGATTGC AATGCATCGT
CTCGTCGATC CATTGTTCCA ATCTAAGCCT GACTTCCAAA TCATGAGTGA ACTAACTCAG
CGTTTTGGTC GCCGCGAAGA ATACACTCGT GGTATGAGCG AGATGGAATG GATCGAAAGC
CTTTACAACG ATTGTAAAAA AGCGAACGAA GGTAAGTTTG AAATGCCAGA ATTCAACGAG
TTCTGGGAGA AGAGCGTACT AGACTTCGGT GAAGGTAAAC CTTGGGTTCG TCATGCGGAC
TTCCGTAAAG ACCCTGAGCT TAACCCACTA GGTACGCCGT CTGGTTTCAT CGAGATCACG
TCTCGTAAGA TCGGCCGTTA CGGCTACGAA CATTGTCAAG AACACCCAAT GTGGTTCGAA
AAATCAGAGC GTTCACACGG TGGCCCTGGT TCAGATAAAT ACCCATTCTG GTTGCAGTCT
TGTCACCCAG ACAAGCGTCT GCACTCTCAA ATGTGTGAAT CTGAAGAGTT CCGTGCAACT
TACGCGGTGC AAGGTCGTGA GCCTGTTTAC ATCAACCCAG CGGATGCGAA AGCGAAAGGC
ATCAAAGACG GTGACTTAGT GCGCGTATTC AACGGTCGTG GTCAGCTATT AGCTGGTGCT
GTTCTTACTG ACAGCTACCC ACGTGGCGTT ATTCGTATCG AAGAAGGTGC ATGGTACGGT
CCTCTAAACG AGAAAGAGGG CGCAATCTGT ACTTACGGTG ACCCTAACAC GCTAACGCAA
GACATTGGCT CTTCTGAACT TGCGCAGGCG ACTTCTGCGA ACACATGTAT CGTAGACTTC
GAGAAGTTCA CCGGCAAAGT ACCGCCAGTG ACTTCATTCG GTGGTCCAAT CGAAGTTGCT
TAA
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| Protein sequence | MAITRRSFLK GVATTSAASV IGPSLLASAS ANAVETTGTW KVTGSHWGAF RAHIYAGKVQ
EIKPLELDKN PTEMLNGIKG IIYSPSRVRY PMVRLDWLKK HKYSADTRGN NRFIRVTWDE
ALDLFYRELE RIQKDYGPWA LHAGQTGWNQ TGSFNNCTAH MQRAVGMHGN FITKVGDYST
GAGQTIMPYV LGSTEVYAQG TSWSEILENS DNIVLWANDP VKNLQVGWNC ETHESFKYLA
QLKEKVAKGE INVLSVDPVK NKTQRYLEND HLYINPLTDV AFMLAVAHVL YNEDLYDKKF
IDTYCLGFEE FIQYVQGKTK DKVEKTPEWA ATICGVKADK IREFARMLVS GRTQILMGWC
IQRQEHGEQP YWAAAVVAAM VGQIGLPGGG ISYGHHYSSI GVPSTGFAGP GGFPRNLDQG
MKPKWDNNDF NGYSRTIPVA RWIDCLLEPG KEINYNGGKV KLPDFKMMVI SGCNPWHHHQ
DRNRMKKAFR KLQTVVTIEF AWTATCRFSD IVLPACTQWE RNDIDVYGSY SNKGLIAMHR
LVDPLFQSKP DFQIMSELTQ RFGRREEYTR GMSEMEWIES LYNDCKKANE GKFEMPEFNE
FWEKSVLDFG EGKPWVRHAD FRKDPELNPL GTPSGFIEIT SRKIGRYGYE HCQEHPMWFE
KSERSHGGPG SDKYPFWLQS CHPDKRLHSQ MCESEEFRAT YAVQGREPVY INPADAKAKG
IKDGDLVRVF NGRGQLLAGA VLTDSYPRGV IRIEEGAWYG PLNEKEGAIC TYGDPNTLTQ
DIGSSELAQA TSANTCIVDF EKFTGKVPPV TSFGGPIEVA
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