| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003815 |
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| Symbol | |
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| ID | 8557550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2445084 |
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| End bp | 2446094 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406912 |
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| Product | Psp operon transcriptional activator |
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| Protein accession | YP_003286440 |
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| Protein GI | 262394586 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAA ACCTGATTGG TGAATCACCT GCTTTTCTCG CCGTACTAGA TAAAGTATCA
CAACTTGCGC CTATTGAGCG TCCAGTCCTC ATTATCGGTG AACGAGGAAC GGGTAAAGAA
CTCATCGCTC AGCGTTTGCA TTATTTATCA AGACGTTGGG ATAAGCCACT ACTATCACTC
AACTGTGCGA CCTTAAGCGA AGGACTAATA GATTCAGAGC TATTTGGTCA TGAATCCGGT
TCTTTTACAG GTTCTAAGGG CAAGCATAAA GGACGTTTCG AACGCGCCGA AGGCGGCACT
TTGTTTCTTG ACGAACTGGC CACCGCACCA CTTTTAGTTC AAGAAAAGCT GTTGCGTGTC
ATCGAATATG GTGAATATGA ACGAGTTGGC GGTCATACCG CTCTCAATGC GGATGTTCGA
CTTGTTTGTG CAACCAATGC GGACTTACCA AAATTGGCGG AACAAGGCGA TTTCCGTGCC
GACTTACTCG ATCGTTTAGC GTTTGATGTC ATCATGCTGC CTCCTCTTCG TGAACGAAAA
GAAGACATCC TCTCTTTAGC AGAGCACTAC GCGATGAAGA TGTGTCGTGA ACTTCAACTG
GAATATTTTG TCGGTTTTAC CTCAAAAGCA CAGCATTCGC TTCTTGAATA TGAATGGCCA
GGTAATGTCC GTGAACTAAA AAACGTGATT GAACGTGCTA TTTACCAACA TGGTCTCAAT
GCCGATCCAA TTGATGAACT GATTTTCAAT CCTTTTGAAA CAGTTTGGAA TAACACGCTT
GGTCATAATG CCGAGCAAGC CGAACTGCAG CAAGAAGAGG AAGCACCAAG CAGCGCAGTT
CAATTCCCTC TAGACTATAA ACAGTGGCAA GAAGAGCAAG ACATCCACTT ACTCAATCGC
GCATTGGAAG AAGCCAAGTT TAATCAACGA CAAGCAGCCG AGCTACTTGG TTTGAGCTAC
CACCAATTAC GAGGGATGAT TAGAAAATAT GGTTTAGTCG GGCAAAGCTA G
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| Protein sequence | MKQNLIGESP AFLAVLDKVS QLAPIERPVL IIGERGTGKE LIAQRLHYLS RRWDKPLLSL
NCATLSEGLI DSELFGHESG SFTGSKGKHK GRFERAEGGT LFLDELATAP LLVQEKLLRV
IEYGEYERVG GHTALNADVR LVCATNADLP KLAEQGDFRA DLLDRLAFDV IMLPPLRERK
EDILSLAEHY AMKMCRELQL EYFVGFTSKA QHSLLEYEWP GNVRELKNVI ERAIYQHGLN
ADPIDELIFN PFETVWNNTL GHNAEQAELQ QEEEAPSSAV QFPLDYKQWQ EEQDIHLLNR
ALEEAKFNQR QAAELLGLSY HQLRGMIRKY GLVGQS
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