| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003809 |
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| Symbol | |
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| ID | 8557544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2438150 |
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| End bp | 2441260 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406906 |
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| Product | transporter AcrB/D/F family |
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| Protein accession | YP_003286434 |
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| Protein GI | 262394580 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC TTAATAAATC AGTGCCTCAA AGTGATGATG ATGTGACCGG TATTGCTGCG
TACTTCATCC GAAATCGTGT CATCAGTTGG ATGGTCGCAC TGATCTTTTT GATTGGTGGT
ATCGCTGCAT TCTTTGGGTT AGGGCGTCTT GAAGACCCTG CTTTTACCAT CAAAGATGCC
ATGGTGGTGA CCTCTTACCC TGGTGCGACG CCGCAACAAG TCGAAGAAGA AGTGACTTAT
CCGATCGAAA AAGCGATTCA GCAGCTTACT TATGTTGATG AAGTGAATTC GATTTCTAGC
CGAGGATTAT CGCAAATCAC GGTCACGATG AAGAACAATT ATGGCCCTGA TGATCTGCCA
CAAATCTGGG ATGAGTTACG CCGTAAAGTG AATGACCTTA AAGGGACGTT GCCTCCGGGT
GTGAATGAAC CTCAAGTGAT CGATGATTTT GGTGATGTTT ACGGGATTTT GTTAGCGGTG
ACTGGCGACG GTTATAGCTA TAAGGAGCTA CTGGATTACG TCGATTACTT ACGCCGAGAG
CTCGAACTGG TTGATGGAGT GAGCAAAGTT TCGGTATCCG GGCAGCAGCA AGAGCAAGTT
TTCATCGAAG TATCGATGAA AAAGCTGAGC AGTATAGGAC TTTCTCCCGA TACGGTCTTT
AATCTTCTCT CGACGCAAAA CGTGGTTTCT GACGCAGGGG CGATCAGAAT TGGTGACGAG
TACATCAGAA TTCAGCCGAC TGGCGAATTC CAGAGTGTGG ATGAGCTAGG CGATTTGTTG
ATTACTGAGT CGGGAGCTCA GGGGCTCATC TTCTTGAAAG ATGTGGCGGA AATAAAACGT
GGGTATGTAG AAGTACCGAG TAATATTATT AATTTTAACG GCAGCCTCGC ACTGAACGTG
GGTGTTTCTT TTGCTGAAGG TGTCAACGTC GTTGAAGTCG GAAAAGCATT TGATCATCGC
CTTGCCGAGC TAAAGTACCA ACAACCTGTC GGTATCGAAA TTTCCGAAAT TTACAGTCAG
CCTAAAGAGG TGGATAAATC GGTTAGCGGT TTTGTTGTCA GCTTGGCTCA AGCTGTCGGT
ATCGTCATTA TCGTACTTCT GTTCTTTATG GGGCTACGTT CAGGTCTGCT TATCGGTTTA
ATTTTACTGC TGACGGTGTT GGGTACGTTC ATTTTCATGA AGTATCTCGC GATAGATTTG
CAGCGGATTT CATTAGGTGC TTTGGTTATC GCGTTAGGTA TGCTGGTGGA CAATGCAATC
GTCGTGGTTG AGGGGATTTT GATTGGTACC CAAAAAGGGC GAACTCGACT CCAAGCGGCG
ACTGATATCG TTACCCAAAC CAAGTGGCCA TTACTTGGGG CAACTGTGAT TGCGGTAACT
GCATTTGCGC CCATTGGACT GTCTGAAGAC TCGACGGGTG AATACTGTGG CACTTTGTTT
ACGGTTCTGC TGATCTCATT GATGTTGAGT TGGTTTACCG CTATCTCGTT GACACCATTC
TTTGCTGACA TCTTCTTTAA AGGCCAGAAG ATTAAACAAG GTGAAGGGGA AGAAAATGAT
CCATATAACG GGGTTATTTT CGTTATTTAT AAAAAGTTTC TTCAGTTTTG TATGCGTCGT
GCTTGGTTTA CCGTTGTGGT GCTGATTGCG GGATTAGCGG CAAGTGTTTA CGGGTTCACC
TTTGTGAAGC AAGCGTTTTT CCCATCTTCG ACAACGCCGA TTTTTCAGTT AGATGTATGG
ATGCCAGAAG GAACTGATAT TCGAGCAACC AACACAACGC TTAAAGAGTT AGAAAGTTGG
TTAGCTAAGC AAGAGCATGT TGACCATATC ACGACGACCG CGGGTAAAGG CTTACAGCGC
TTCATGTTAA CGTACGCGCC CGAGAAAAGT TATGCGGCTT ATGGTGAGAT AACCACTCGT
ATGGAAAATT ACGAAGCGTT GAAACCATTA ATGGCGAAGT TTCGAGAGTA TTTAAAAGCC
AACTACCCAG AAATCAATTA CAAGCTCAAA CAGATTGAGT TAGGTCCAGG TGGTGGTGCA
AAAATTGAAG CGCGCATTAT TGGCTCTGAT CCAACCGTCC TTCGTACGAT AGCCGCTCAG
GTCAAGGACA TCATGTACGC CGATCCTCAG GCAACAAATA TCAGGCATGA TTGGCGTGAA
CGAACCCAAG TTCTTGAGCC TCAGTTTAAT GAGAGTCAGG CACGTCGCTA TGGCATTACA
AAATCAGATG TCGATGACTT CTTGTCCATG TCATTCTCTG GAATGACGAT AGGCCTTTAC
CGAGACGGCA CGACGCTCAT GCCTATCGTG GCTCGCTTAC CTGAAGATGA ACGCATCGAT
ATTCGTAACA TTGAAGGCAT GAAAATATGG AGTCCAGCAC AGAGTGAGTT TATCCCACTT
CAACAAGTCA CAATGGGTTA CGACATGCGT TGGGAGGATC CTATCATCGT ACGTAAGAAC
CGTAAGCGTA TGCTCACTGT GATGGCAGAC CCTGATATTC TTGGTGAAGA AACCGCATCG
ACGTTGCAAA AACGTTTACA GCCCCAAATC GAAGCGATTC AAATGCCTCC TGGCTATTCA
CTAGAATGGG GGGGGGAATA CGAATCTTCA GGTGATGCTC AAGAGTCGCT GTTTACTACC
ATGCCAATGG GGTACTTGTT CATGTTCTTG ATCACCGTAT TCCTATTTAA CTCTATCAAA
GAGCCACTCA TTGTTTGGCT TACCGTGCCG TTGGCGTTAA TTGGTGTCAC CACCGGTTTG
TTAGCACTCA ACACGCCGTT TGGTTTTATG GCTTTGCTCG GCTTCTTAAG CTTATCGGGA
ATGGTGCTCA AAAATGGCAT CGTATTACTG GACCAAATTG AAATAGAAAT GAAATCAGGT
AAAGAGGCTT ATGATGCGGT CGTTGATGCT GCGGTAAGCC GTGTTCGTCC TGTGTGTATG
GCTGCAATCA CGACGATCCT TGGTATGATC CCACTATTAC CAGATATTTT CTTCAAACCA
ATGGCGGTTA CGATTATGTT TGGTTTGGGC TTTGCGACAG TCCTGACACT GATTGTCGTG
CCAGTGTTGT ATCGTTTGTT CCATAAAGTG GCAGTACCGA AACAGGCTTA G
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| Protein sequence | MSDLNKSVPQ SDDDVTGIAA YFIRNRVISW MVALIFLIGG IAAFFGLGRL EDPAFTIKDA
MVVTSYPGAT PQQVEEEVTY PIEKAIQQLT YVDEVNSISS RGLSQITVTM KNNYGPDDLP
QIWDELRRKV NDLKGTLPPG VNEPQVIDDF GDVYGILLAV TGDGYSYKEL LDYVDYLRRE
LELVDGVSKV SVSGQQQEQV FIEVSMKKLS SIGLSPDTVF NLLSTQNVVS DAGAIRIGDE
YIRIQPTGEF QSVDELGDLL ITESGAQGLI FLKDVAEIKR GYVEVPSNII NFNGSLALNV
GVSFAEGVNV VEVGKAFDHR LAELKYQQPV GIEISEIYSQ PKEVDKSVSG FVVSLAQAVG
IVIIVLLFFM GLRSGLLIGL ILLLTVLGTF IFMKYLAIDL QRISLGALVI ALGMLVDNAI
VVVEGILIGT QKGRTRLQAA TDIVTQTKWP LLGATVIAVT AFAPIGLSED STGEYCGTLF
TVLLISLMLS WFTAISLTPF FADIFFKGQK IKQGEGEEND PYNGVIFVIY KKFLQFCMRR
AWFTVVVLIA GLAASVYGFT FVKQAFFPSS TTPIFQLDVW MPEGTDIRAT NTTLKELESW
LAKQEHVDHI TTTAGKGLQR FMLTYAPEKS YAAYGEITTR MENYEALKPL MAKFREYLKA
NYPEINYKLK QIELGPGGGA KIEARIIGSD PTVLRTIAAQ VKDIMYADPQ ATNIRHDWRE
RTQVLEPQFN ESQARRYGIT KSDVDDFLSM SFSGMTIGLY RDGTTLMPIV ARLPEDERID
IRNIEGMKIW SPAQSEFIPL QQVTMGYDMR WEDPIIVRKN RKRMLTVMAD PDILGEETAS
TLQKRLQPQI EAIQMPPGYS LEWGGEYESS GDAQESLFTT MPMGYLFMFL ITVFLFNSIK
EPLIVWLTVP LALIGVTTGL LALNTPFGFM ALLGFLSLSG MVLKNGIVLL DQIEIEMKSG
KEAYDAVVDA AVSRVRPVCM AAITTILGMI PLLPDIFFKP MAVTIMFGLG FATVLTLIVV
PVLYRLFHKV AVPKQA
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