Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003708 |
Symbol | |
ID | 8557443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2318678 |
End bp | 2319469 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646406805 |
Product | outer membrane lipoprotein-sorting protein |
Protein accession | YP_003286333 |
Protein GI | 262394479 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.212614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTAC TAAAAAATGC CTTAAAAGTA TCTGCACTTT CTGTCTCGCT TTTTATGAGT CATGCGGTGT TAGCGGATGA AGCGAAAGGA TTAGAAATTG CTCAAGAGCG CAAAGCCCGT GATGAAGGGT GGGGGGATTC TGTTGCTACC ATGAAAATGA TTCTGCGGAA CGCACAAGGA GAAAGCAGCA CACGTTTAAT GCGCCTCCAA TCACTCGAAG TTGAGGACGA TGGTGACAAA GGACTCACAA TATTTGATGA ACCAAGAGAT GTGAAAGGCA CCGCGTTTCT CAACCACTCT CATACAGTGG GTGCCGATGA CCAGTGGCTT TACCTTCCAG CACTGAAGCG TGTGAAACGT ATTTCCTCGC GTAACAAATC AGGCCCTTTC ATGGGCAGTG AATTTGCGTA TGAGGATCTC AGTTCCTTTG AGATTGAAAA ATACCGTTTC AATTACTTAA AAGATGACAC CATAAATGGG CAAGATGTTT TCGTCATAGA GCAAATCCCT ACAGACAAAA ATTCAGGTTA TACCAAGCAA ACGGTGTGGT TAGATAAAGC GCATTATCGC CCACTGAAAG TTGAGTTTTA CGATCGCAAA GGGTCGTTGT TAAAAACGCT TTCTTTCTCA GATTACAAGC AGTACCTCAA CCAATATTGG CGAGCGCACA CCATGGCGAT GACAAATCAT CAAACAGGAA AAAGCACTGA GCTAACAACA AGTGAAATGC GCTTTAACAC TGGGCTAGAA GACAATGATT TTCATAAGAA TGTGTTAAAG CGAGTGAGGT AG
|
Protein sequence | MNLLKNALKV SALSVSLFMS HAVLADEAKG LEIAQERKAR DEGWGDSVAT MKMILRNAQG ESSTRLMRLQ SLEVEDDGDK GLTIFDEPRD VKGTAFLNHS HTVGADDQWL YLPALKRVKR ISSRNKSGPF MGSEFAYEDL SSFEIEKYRF NYLKDDTING QDVFVIEQIP TDKNSGYTKQ TVWLDKAHYR PLKVEFYDRK GSLLKTLSFS DYKQYLNQYW RAHTMAMTNH QTGKSTELTT SEMRFNTGLE DNDFHKNVLK RVR
|
| |