| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003704 |
|---|
| Symbol | |
|---|
| ID | 8557439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2312793 |
|---|
| End bp | 2313674 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646406801 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_003286329 |
|---|
| Protein GI | 262394475 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC AAATCATAAA TATTCTTTTC CCTGTTTTTG CTCTTGTCGG CGTCGGCTAT
TTGGTAGGTC GTTACATCAA GCCTGACTTT CGTCCAATCA ACCGCATTAA CATTGAGGTT
TTCACACCTG CGCTGGTGTT TTCTTCGCTC GTTAGCATGC CGTTAGACTC GAATCAGGGA
CCACTCCTTT TTGCAGCAAT TGTCGCGGTT TTGGTTCCCG CAATACTCAT GATCCCTGTA
TGTCGATTGA CGTCACTGTC GTTTAAAACC TGGGCACCAC CACATATGTT TCGCAATAGC
GGAAACCTTG CTATTCCTTT GTTTACCTAT ACGTTTGGAG AAATTGCGCT ATCCTCAGCA
GTACTGCTAT TTGTCGTATC AGCATGCTTG CACATTAGTT TAGGTGTAAT GCTACTTAGT
CATGGCAACC CTTTTAAGCA AATAGTCAAG ATGCCAATCT TTTTAGCTGC GTCGTTGGCT
CTGTTTCTCA ACGTGTCAAA TGTGGGGGCA TGGGCACCTT TATACGAAAC GACTGCTCTA
CTTGGGCAAG CGGCAGTACC CGTGATGCTT TTATCCCTGG GGGCGCAAAT GTGTCATTTA
AGAGTGGACG GTTTAAAGGT TGGTGTATTG TGTACCGTGC AGTCGCTTGC AACTGGGGCG
GTTGCATTTG CACTTATTTA TTGGTTAATT CCCCTTCCAA CGATGCAATT GCAAATGATG
GTACTCTTCA CAATGCTGCC ACCAGCCGTC ATGAATTACC TATTTGCGGA AAGGCTGAAT
ATAGAGCCCA TGAAAGTGGC GTCAATGGTA CTATTTGGCA ACTTTTTCAG TATTCTTACG
CTCCCACTTC TGCTTAGCTA TACCCTCTCA CTCGCCGCCT AG
|
|---|
| Protein sequence | MINQIINILF PVFALVGVGY LVGRYIKPDF RPINRINIEV FTPALVFSSL VSMPLDSNQG
PLLFAAIVAV LVPAILMIPV CRLTSLSFKT WAPPHMFRNS GNLAIPLFTY TFGEIALSSA
VLLFVVSACL HISLGVMLLS HGNPFKQIVK MPIFLAASLA LFLNVSNVGA WAPLYETTAL
LGQAAVPVML LSLGAQMCHL RVDGLKVGVL CTVQSLATGA VAFALIYWLI PLPTMQLQMM
VLFTMLPPAV MNYLFAERLN IEPMKVASMV LFGNFFSILT LPLLLSYTLS LAA
|
|---|
| |