| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003663 |
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| Symbol | |
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| ID | 8557398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2269618 |
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| End bp | 2272062 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406760 |
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| Product | microbial collagenase secreted |
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| Protein accession | YP_003286288 |
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| Protein GI | 262394434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA AGATTTTGAG TGTCGCGATT GCGACAACAT TAACCAGCAC TGGCGTATTT
GCGTTAAGCG AGCCAGTTTC TCAAGTTACA GAGCAACATG CACATTCGGC TCATACACAC
GGTGTTGAAT CCAATCGAGT TGAATACCAA CCAACCGCAA CTCTCCCAAT TCAGCCCTCT
AAGGCAACTC GAGTACAGTC ACTTGCAAGC CTTGATGAGT CGAGCACTGC TTGTGATTTG
GAGGCATTGG TTACCGAAAG CAGTAACCAA TTGATCAGCG AAATTTTAAG TCAGGGCGCG
ACGTGTGTGA ACCAGTTATT CTCTGCTGAA AGTCGGATTC AAGAGTCGGT ATTTAGCTCC
GATCATATGT ACAACATCGC TAAGCACACT ACGACATTGG CGAAGGGGTA TACGGGTGGC
GGGAGCGATG AACTAGAAAC GTTGTTCTTA TACTTACGCG CGGGTTATTA CGCCGAGTTT
TACAATGACA ACATCTCATT TATTGAATGG GTAACCCCTG CGGTGAAAGA GTCCGTGGAT
GCGTTTGTTA ACAACGCAAA CTTCTACGAG AACAGCGATC GTCATGGCAA AGTGCTTAGT
GAAGTTATCA TCACTATGGA TAGTGCGGGC TTGCAGCACG CGTACTTACC GCAAGTGACC
CAGTGGCTTA CACGTTGGAA TGATCAATAC GCCCAGCACT GGTATATGCG CAATGCGGTT
AATGGTGTTT TCACTATTTT GTTTGGTGGG CAGTGGAACG AGCAATTTGT GCAAGTAATT
GGTAACCAAA CAGACCTTGC CAAAGCTTTA GGCGATTTTG CTCTAAGGGC GTCATCAATC
GGTGCTGAAG ATGAGTTTAT GGCCGCGAAT GCAGGGCGAG AGCTCGGGCG TCTGACCAAG
TATACGGGTA ACGCGAGTTC TGTTGTGAAG AGTCAGCTGA GTCGAATCTT TGAACAGTAT
GAAATGTATG GTCGGGGTGA CGCGGTTTGG CTTGCGGCGG CGGACACCGC CTCATATTAC
GCAGATTGTA GTGAGTTCGG AATTTGTAAT TTCGAAACTG AGCTAAAAGG CTTGGTGCTA
TCGCAAACTT ATACTTGTAG TCCGACAATT CGAATATTGT CCCAGAATAT GACGCAAGAG
CAACACGCGG CCGCATGTTC TAAAATGGGC TACGAAGAGG GTTACTTTCA TCAGTCATTA
GAAACTGGTG AACAGCCAGT AAAAGATGAC CACAATACTC AGATCCAAGT CAATATCTTC
GATTCAAGCA CCGATTATGG TAAGTACGCA GGGCCAATTT TCGATATTAG TACTGACAAT
GGCGGTATGT ACTTGGAGGG CGATCCTTCC CAGCCGGGGA ATATTCCCAA CTTTATTGCT
TATGAAGCCT CTTATGCGAA CGCGGATCAC TTTGTCTGGA ACTTAGAGCA CGAATACGTG
CATTACTTAG ATGGTCGATT TGATCTCTAT GGAGGGTTTA GTCATCCAAC TGAAAAAATA
GTGTGGTGGA GTGAAGGCAT TGCAGAGTAT GTCGCTCAAG AAAATGACAA CCAAGCAGCA
CTTGAGACGA TTTTAGACGG CTCGACGTAT ACCTTAAGTG AGATTTTCGA GACTACTTAT
GATGGGTTTG ATGTCGATCG AATTTATCGT TGGGGGTACT TAGCTGTACG TTTTGTGTTT
GAAAATCATA AAGATGACGT AAACCAAATG CTGGTGGAAA CACGCCAAGG GAATTGGAGC
AATTACAAGG CCACGATCAC CCAATGGGCG AATTTGTATC AAAGTGAGTT TGAGCAGTGG
CAGCAAGCCC TTGTCTCAAA TGGTGCACCT AATGCAGTCA TAACCGCAAA CAACAAGGGG
AAAGTCGGTG AAAGCATTAC ATTTAGCAGT GAAAACAGTA CAGACCCAAA CGGGAAGATC
GTCAGCGTCT TATGGGACTT CGGTGATGGC TCGACAAGTA CACAAACCAA GCTGACGCAC
CAATATGGGA GTGAAGGGGA GTATTCGGTC AGCCTAAGTG TGACAGACAG TGAAGGCTTG
ACGGCAACCG CCACTCATAC TGTTGTTATC TCAGCGTTGG GCGGTAATGA CACATTGCCA
CAAGACTGCG CGGTGCAAAG TAAAGTAAGC GGTGGGCGCC TAACAGCAGG AGAACCAGTT
TGCTTGGCAA ATCAACAAAC CATTTGGCTA AGCGTGCCAG CGGTGAATGA GAGCTCAAAC
CTGGCGATAA CGACGGGGAA TGGTACGGGC AACCTAAAGC TTGAATACAG TAACTCTGGT
TGGCCGGATG ATACTAATCT TCACGGATGG TCAGATAATA TTGGTAATGG AGAGTGTATT
ACGTTGTCAA ATCAGAGTAA CTACTGGGGC TACGTTAAAG TCTCTGGTGA CTTTGAGAAT
GCCGCCATCG TCGTTGATTT TGATGTTCAG AAGTGTCGTC AGTAG
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| Protein sequence | MELKILSVAI ATTLTSTGVF ALSEPVSQVT EQHAHSAHTH GVESNRVEYQ PTATLPIQPS
KATRVQSLAS LDESSTACDL EALVTESSNQ LISEILSQGA TCVNQLFSAE SRIQESVFSS
DHMYNIAKHT TTLAKGYTGG GSDELETLFL YLRAGYYAEF YNDNISFIEW VTPAVKESVD
AFVNNANFYE NSDRHGKVLS EVIITMDSAG LQHAYLPQVT QWLTRWNDQY AQHWYMRNAV
NGVFTILFGG QWNEQFVQVI GNQTDLAKAL GDFALRASSI GAEDEFMAAN AGRELGRLTK
YTGNASSVVK SQLSRIFEQY EMYGRGDAVW LAAADTASYY ADCSEFGICN FETELKGLVL
SQTYTCSPTI RILSQNMTQE QHAAACSKMG YEEGYFHQSL ETGEQPVKDD HNTQIQVNIF
DSSTDYGKYA GPIFDISTDN GGMYLEGDPS QPGNIPNFIA YEASYANADH FVWNLEHEYV
HYLDGRFDLY GGFSHPTEKI VWWSEGIAEY VAQENDNQAA LETILDGSTY TLSEIFETTY
DGFDVDRIYR WGYLAVRFVF ENHKDDVNQM LVETRQGNWS NYKATITQWA NLYQSEFEQW
QQALVSNGAP NAVITANNKG KVGESITFSS ENSTDPNGKI VSVLWDFGDG STSTQTKLTH
QYGSEGEYSV SLSVTDSEGL TATATHTVVI SALGGNDTLP QDCAVQSKVS GGRLTAGEPV
CLANQQTIWL SVPAVNESSN LAITTGNGTG NLKLEYSNSG WPDDTNLHGW SDNIGNGECI
TLSNQSNYWG YVKVSGDFEN AAIVVDFDVQ KCRQ
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