| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003646 |
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| Symbol | |
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| ID | 8557379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2251543 |
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| End bp | 2253039 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646406741 |
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| Product | Rtn protein |
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| Protein accession | YP_003286271 |
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| Protein GI | 262394417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.191935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTACAA AGATAACAAG AAATGCCATT TTGCTTGGCC TAGTTCCCAT TGCAGTTTTT
GTTGTGGCTT TTAATTCAAT AGCCAATTTT TACATCAGCT ATATCAAAGA GACTAAAATA
GACACCTATG TCGATTATTT ACACCAACGA TCCATGTATT TGGATGAGGC GATTGTAAAG
CAGGTTTCGC AGTTAGATTT CACGTGCAGT AATAGTGATG TTAGAACATT ACGCGACCCA
CGTTTTTATA ATCGTTACAT CCGTTTTATT GCGATGGAAA CGAATGACGG TAAAACATGC
TCCACGATTG GTCGCGAAGT ATCTCATTTA TCCAATGCGC AACGATTTCA GCTTGGCGAA
AACTTTTTTG TATCACTTAT TTTACCGGAA CACCAAGATC AAGTTGAGTG GATGGTCATT
TATGAAAATG AACATGTCGA AGTTATCTGG GTTCTCGATA ATAGTTGGGT TAAAGAAGTG
ATCAAAACGC CTTGTGAAGA CTGTTTGTTC GTCGAGTTTA TATATGATGA GCCTGTATTT
GGAGATTTAA CAATAAGTCG AGGAAAACCA GCCATTGCAG CAGAAGAAGC GGCAGTTTCA
AAGGAGTTAT TCTTCTCGGC TGATTCTCAA GCCAATATGC TCATCAAAAT ACACAGTGGC
GAGAAACTGA AGAGCTATGC TCAGGAAAGA GTCTTTCTAT GGGGAGGCCT AGTCAGTGTG
CTTATGGGGC TGGCTTTTGC GTTTGTATAT GTGTCCAGTA AGAGCTTGAG AAAGTCTATC
AAAGGCTTGA TCCAGAATGG GATTAATAAT GCGGAATTTG TCCCTTATTA CCAAGCGATT
GTCGATAGCC GTGATGGTGC GACAGTGGGG TATGAAGCAC TGATTCGGTG GTCTCGTCGT
GAGGGTATGG TGTCGCCAAA CATGTTCATT GGCGCTGCAG AAGAAAGTGG TCTGATTGTC
CCAATGACGA ATCAGCTTAT TCGTAAAATC ATACAAGATC TTAGTGTATT GCCTGAGCAT
GTGTGGGTCA GCATCAATAT TGTTTCTTCC CATTTAGAAT CAGGTGAACT CACTAAGTTA
CTGTCAGAAC TGAATTGGCC ATGTCCGAAG AGAGTGCATT TTGAGTTGAC CGAGCGAATT
CCTGTAAAAG ATACAGAGGC AGCGAAAAAA GAGATTTTGT ATCTGGCGAA TAAAGGCTAC
AAGTTCAAAA TTGACGATTT TGGGACTGGG TATGGCGGCT TTTCTTATTT GCAAGATCTG
GGTATCCGAT GCTTAAAAGT GGATAAGATG TTCATCGATC CAATAGGCTC TGATGACCAA
AAATTGAAAG TGTTAGATTC TATTGTCTCG GCAGCAAAGA AAGCGGAATG TGAGATGATT
GCAGAAGGTG TAGAGAGCGA GGCTCAAGTC GCGTATTTGG CTCAGCATTC TATTTACCTT
ATTCAAGGGT ATGTCTACGC TAAACCAGAG CCTATTAACA ACCTTGTGAT GACTTAA
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| Protein sequence | MITKITRNAI LLGLVPIAVF VVAFNSIANF YISYIKETKI DTYVDYLHQR SMYLDEAIVK
QVSQLDFTCS NSDVRTLRDP RFYNRYIRFI AMETNDGKTC STIGREVSHL SNAQRFQLGE
NFFVSLILPE HQDQVEWMVI YENEHVEVIW VLDNSWVKEV IKTPCEDCLF VEFIYDEPVF
GDLTISRGKP AIAAEEAAVS KELFFSADSQ ANMLIKIHSG EKLKSYAQER VFLWGGLVSV
LMGLAFAFVY VSSKSLRKSI KGLIQNGINN AEFVPYYQAI VDSRDGATVG YEALIRWSRR
EGMVSPNMFI GAAEESGLIV PMTNQLIRKI IQDLSVLPEH VWVSINIVSS HLESGELTKL
LSELNWPCPK RVHFELTERI PVKDTEAAKK EILYLANKGY KFKIDDFGTG YGGFSYLQDL
GIRCLKVDKM FIDPIGSDDQ KLKVLDSIVS AAKKAECEMI AEGVESEAQV AYLAQHSIYL
IQGYVYAKPE PINNLVMT
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