| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003591 |
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| Symbol | |
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| ID | 8557324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2190014 |
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| End bp | 2191483 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646406686 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003286216 |
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| Protein GI | 262394362 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAACGAG ATCTCATCAT CAATAACACG TTAGAGTCCA ACCTCGTTTA TGCGCAAAAA
ATGTCAGAAA TGACGGACTC TTTCATAGAA AGCTCAATGT CGCAGCTAAA ATACAGTGCG
AACTTGCTAA AAGATAAGAT GCACGATGCT CAGTTTCTTG ACGAAGAGGC GGAGAGGCTG
AGAAAGCAAA CCAAATCATT CAACTCTGTG GTTATCGTTA ATGCGAAAGG CGTCATTATT
TCTGTATCAC CAGAGACACT TCAGGTGAAA GGTGTAAAGC TCGTTGGTGA AAGAAAACGT
CAATCTTTAA ATGCTCAAGC GCCCGTTGTC ACTGAGCCAT TCATCTCACC CGCAGGTAAT
TATCTGTTAA CGATCTCATA CCCTATATTT TCTCAGTCCA ATGAATATTT AGGCTATATC
GGCGGTACTA TTTATTTAGA GAAGGACAAT ATTCTTGCTG AATTACTTAG CCAGCATGCT
TACAAAGATG GCTCTTTCCT TTACGTTGTG GACGAAAGCA ACACGCTGAT CTACCACCCA
GATAAATCGC GGGTTGGTGA AGTGATCAAC GATAATATGG CAATTAACGC CGTGATAATG
GGTCAGCGTG GTAACAAAGA AATTGTGAAC TCTCGTGGTG TTGAAATGCT AGCAGGGTAT
GCACCAGTTG AATCATCAGG GTGGGGAATT GTCGCTCAGC GCCCGAAATC AATGACGTTA
ATGGTGCTAG ATGAGCAGAT GTGGAGTGTA TTTTTCAAAT CGATTCCAAT TGGTTTATTA
ACTCTGCTGT TGATCTGGTT CTTCTCTTTA CTTATTTCAA GACCATTATG GCAATTGGCT
GGCGCTGTTC GAGGAGTAGA AGAGCACTCC TCATCCATCG ATGATTTGAA GCTGGTTAAG
TCTTGGTATT TTGAGGCTTC ACATTTGAAG CTCAGTTTCC TCAAAGCGTT TGGTATCGTT
TCAAAAACCA TTGATAAGCT GCAACTGGAT ACGCTAACAG ACGCGATGAC TGGGTTGTTA
AATCGACGCG GCTTAGACAA AGTTCTAGGC TTGTTTAAGC AAGAAAACAC CGCTTTTTCT
ATTTTAGCTT TGGATATTGA TCATTTTAAG AGCGTCAATG ATAACTATGG TCATGATGTG
GGTGACAATC TACTCAAAGA ATTCGCTCAG TTGATGAAAG AGCAAGCCCG AGCGAATGAT
CATCTTTGCC GTTCCGGTGG GGAAGAGTTC ATGATGTTCC TTGAAGCGAC GGATGTTCAT
CACGCGGTTG ATGTCGCAGA GCGGATTAGG CATAACGTAG AAAAACACGA TTTCCTGGTC
GTTGGTAAGG TAACGGTATC ACTTGGAGTT TCTCACTGGA AAGGCAACGA TATGCCAATT
GAAGCGGTAA TGAAAGACGC GGACAACGCT CTGTATAAAG CAAAGCGCAA CGGAAGAAAC
AGAACCGAGT TAGGTGAAGA CGCACAATAG
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| Protein sequence | MQRDLIINNT LESNLVYAQK MSEMTDSFIE SSMSQLKYSA NLLKDKMHDA QFLDEEAERL
RKQTKSFNSV VIVNAKGVII SVSPETLQVK GVKLVGERKR QSLNAQAPVV TEPFISPAGN
YLLTISYPIF SQSNEYLGYI GGTIYLEKDN ILAELLSQHA YKDGSFLYVV DESNTLIYHP
DKSRVGEVIN DNMAINAVIM GQRGNKEIVN SRGVEMLAGY APVESSGWGI VAQRPKSMTL
MVLDEQMWSV FFKSIPIGLL TLLLIWFFSL LISRPLWQLA GAVRGVEEHS SSIDDLKLVK
SWYFEASHLK LSFLKAFGIV SKTIDKLQLD TLTDAMTGLL NRRGLDKVLG LFKQENTAFS
ILALDIDHFK SVNDNYGHDV GDNLLKEFAQ LMKEQARAND HLCRSGGEEF MMFLEATDVH
HAVDVAERIR HNVEKHDFLV VGKVTVSLGV SHWKGNDMPI EAVMKDADNA LYKAKRNGRN
RTELGEDAQ
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