Gene VEA_003561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003561 
Symbol 
ID8557294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2154109 
End bp2154795 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content46% 
IMG OID646406656 
Producthypothetical protein 
Protein accessionYP_003286186 
Protein GI262394332 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG AAAAATTTGA CGCGATTTAT CAACGTGCTG CTGAGCGAAA AGGCGGAGAA 
GATCAGCTTG AAGCGCTATT GTCTCACCCA TTAAGTAAAG AGGAATTAGC AGCGATTCCC 
GATGACCGTT GGCTCGCCGC TTTTTCGATG AAGGTGTTCC AAAGCGGGAT TTCGTGGAGC 
GTGGTTCGCA ACAAGTGGCC GAACTTCGAA GAAGTGTTCT TCGGCTTTAA GATTGAGCCA 
CTATTGATGC TGTCTGACGA ACAATGGGAA ACCAAAGCAA CGGACAAACG CATTATTCGC 
CACCTCACTA AAGTCATGTC GATTCCGGCC AACGCTCGCA TGATCCATGA AGCAAGAATC 
GAATATGGCT CGTTCAGTAA CATGATTGCT GAATGGCCTC GGGAAAAGAT CACGGATCTA 
TGGGGCTACT TGAAGAAGCA TGGTAGTCGT TTGGGTGGAA ATACAGGCCC TTACACTTTA 
CGCCAAATGG GCGTGGACAC TTTTATTCTG TCTAACGATG TCGAAGCTTA TTTACGCAAC 
TGCAAGATCA TTGAAGGCGG CAAAGACACG AAAAAGTCCT TGGACTCTGC TAATAAAGCC 
TTTATTCAGT GGCAGCAAGA AAGTGGAAGA AGCTTGACCG AAATCAGTCA AATTATCGCG 
TTTAGTACTG GTGACAACCG AATTTAA
 
Protein sequence
MSIEKFDAIY QRAAERKGGE DQLEALLSHP LSKEELAAIP DDRWLAAFSM KVFQSGISWS 
VVRNKWPNFE EVFFGFKIEP LLMLSDEQWE TKATDKRIIR HLTKVMSIPA NARMIHEARI 
EYGSFSNMIA EWPREKITDL WGYLKKHGSR LGGNTGPYTL RQMGVDTFIL SNDVEAYLRN 
CKIIEGGKDT KKSLDSANKA FIQWQQESGR SLTEISQIIA FSTGDNRI