| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003537 |
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| Symbol | |
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| ID | 8557270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2123292 |
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| End bp | 2124722 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406632 |
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| Product | putative lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003286162 |
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| Protein GI | 262394308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAG CAATGACCAA CATGTCGCTG TTCGCTATCG CGTTAGTGAT AAACAAAAGC
ATCAGCTTAA TCATGCTGCC TGTATTGCCC CACTTTCTCT CACCAGAACA AATGGGCAAG
CTTGAACTGC TTACCACCTT TGGCGTTGTC ACAACCTTAT TCGTCAGTTT CGCTTTGCAT
GAAGCGCTGT ATCGATTCGT CGGGGTTGAA AAGGATCAAA ATACGCGCAC AAGCCTTCTA
AACCAGCTGT ACTCACTTGC TTTGTTCATC GCTGGCATCG TGGCTTTATG CCTACTCGCT
ATCATTATGC TCGCGCCTAT TCCTGCACCT TTTACGCGAG TCGAGTTTGC TATTGTTATG
TTTGCTATCG TTCTAGAAGG CAGTATCGCA ATCGGCACAG CTTGGTTGAG AACACAGGAC
GACAAAGCAA GAACCCTACT CAACGTCATG GTGACTACCA CTGTTTTTCA GGTCATTTTC
ATCATCACGG CGCTGTCTGT TCACCCACAT GTTATTTCTG TTTTATGGGG TGGCTTGTTG
GCTGCTATTA CTCAGTTTGT CTGGCTGCAC ATCATTAACC GCTACAGCAT GACTCTTCCA
AATCTGACAG TGGCGAAACA ATACCTAAAT TACTGTCTGC CAATGATGAT GGCTGGATTG
GTTTCGTTTT GTCTCAATGG CGCTGAACGA TGGTTCATCG GCGCGAACGC CTCACTTGCG
ACATTAGGGA TTTACGCGAT AGCCGTAAAA TTTGCGGTTG GCATGTGTAT TTTAGTTCAG
CCATTTGGCA TGTGGTGGAT GCCACGTCGA TTTAATTACC TAGAAGCGCG TAGGAGTACA
GAAGCTGTGC GCATCACTCA TCTAGGTATG ATTTACATTA CCGGTTTAAG TGTTGCAGTC
GGCACATTAG CAATGGTGAT GATCACTTAC CTGTTACCAG AAACCTATCA TGAGGCGGTA
CTGTTCAGCT TGTTCTTACT GCCTATCGCC ATGCTAAAAG AGTGGAGCGA ACTCATTAAT
ATTTCCATTT TGTACAAGCG TCGTACTCGC TGGTTACTGG GTATTAATGT CGTCTCAGCA
TGCGTTGCAA TTGCTTTGCT GTTTGGCCTG TCGTCCCTGG GTATCTATGG AGTTTTCATT
GCGCTTTATT ACGCTCAACT GTGTAAGCTT GGCCTTACTT ATGTGGTAGG CCAACAATGC
ATGCCGTTGC CTTTTCACCT AAGTCTGATG GTTTTATTGC AGATTATCTC CGGTGTGGCA
CTGTTCCTGC TTCACTCTTC ACAATCAATA GGCATCGCCA TCGCAATTTG CATTTTGACA
TGCACTTTGC TGGCAGGGAT AGCCACTCGC TATATGAGTA AAGAGACGCT AAATGCGCTC
ACTCGATACA TGGTGAAATG GCGTGGACAG GTGAAGAGAT ACTCGTTATG A
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| Protein sequence | MSKAMTNMSL FAIALVINKS ISLIMLPVLP HFLSPEQMGK LELLTTFGVV TTLFVSFALH
EALYRFVGVE KDQNTRTSLL NQLYSLALFI AGIVALCLLA IIMLAPIPAP FTRVEFAIVM
FAIVLEGSIA IGTAWLRTQD DKARTLLNVM VTTTVFQVIF IITALSVHPH VISVLWGGLL
AAITQFVWLH IINRYSMTLP NLTVAKQYLN YCLPMMMAGL VSFCLNGAER WFIGANASLA
TLGIYAIAVK FAVGMCILVQ PFGMWWMPRR FNYLEARRST EAVRITHLGM IYITGLSVAV
GTLAMVMITY LLPETYHEAV LFSLFLLPIA MLKEWSELIN ISILYKRRTR WLLGINVVSA
CVAIALLFGL SSLGIYGVFI ALYYAQLCKL GLTYVVGQQC MPLPFHLSLM VLLQIISGVA
LFLLHSSQSI GIAIAICILT CTLLAGIATR YMSKETLNAL TRYMVKWRGQ VKRYSL
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