| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003530 |
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| Symbol | |
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| ID | 8557263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2114750 |
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| End bp | 2116852 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406625 |
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| Product | polysaccharide export periplasmic protein |
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| Protein accession | YP_003286155 |
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| Protein GI | 262394301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGA TGAAACCATT TATCACCTTA GTTCTTTTGT GCTTGGTTGC TTGGGTACCT
ACTTCGTCAG CAGATGAAAA CAATACTGTT AAGGTTGGCG ATTTAATTCA GATTAACCTA
CCTGGAGAAG CGTCTTTAAA CAAAGGGTTT CAAGTTGATC GCCGTGGGCG TATTAACTTA
CCAGAAGTCG GCCCTGTATT TGTTGCTGGA TATAATGAGC AACAACTCCA AGACGTGATT
ATCGAAACGC TAAAAACCGT GTATCGTGAC GTAAACAACG CTCGAGTCTT TATCAAACAA
CAACAGTTAT TAGTGTCAGT CCAAGGCTAC GTGGTCAAAC CCGGGGAATA TACCTTACCT
TCAGGTTCCA ACATTCAAAT GTTTGTATAC GAAGCTGGCG GCCTTCGCGC TGGTGCTCAG
CTCGATAAAA TGATCGTTAA ACGCGGCGAA AAAAACATCG AGTTTGACTA CAAACGTTTC
CTTGATACTG GTGACAATAG CCAGCTCCCG AAATTGGAAT CACTGGACGT ACTGTTTGTT
CCAGCATCTC CACTCGTTGG AAATATTGAG CAAGAATTTG ATGCAGCAAA ACTCGCGAAT
TCAGGCGACA GCGCAGACTC CGCTCGTGCC ATCAAAGTCT TTGGTGAAGT GAATGCACCC
GGCTCATTCT CTTACAAACC GAACACCACG CTCGTTGATG TCGTGATGAG AGCTGGCGGC
GTAACACGAT ATGCCAGTGT TGAGCAAATT CGCGTGATCA CAAATAACAA CCCAACCATG
TTTAATCTAA AAAAATATCT GGATACGGGT GATCAAAGCT TACTACCAGA AATCCTACCG
GGTGCCACCA TCTTTGTTCC AAAACAGGAA GAAGAAATCA AAGCGGGTGC AAATGTGGTT
TATGTCATGG GTGAAGTTGC CCACCCTGGC GCGTATGAGG GAAAGCAAGA CGCTAGCTTC
ATGGATATTC TCGCCAATGC AGGCGGGCCT ACTCGCTATG CAGAATCTCG CCAAATTCGT
GTCATAAAAG CCGATGGTAA GGTCATCAAA TTCGACCTAA CCGCGCATAC CGAGGGTCTG
TCTTCGGTTA GACCACCGAA TGTCGGACCC GGAGACGCGA TTTTCGTGCC TGAAAAAACC
GATTTCAACG AGAAGTCATG GCTAAAAGTG GCGCCAAGTC GAGCGGTCGC TGTGATGGGA
GAAGTCGTGC GCCCGGGACG TATTGAATGG TCAGACGAAA TGGATTTAAT TGATCTGCTT
GCCCATGTCG GCGGCCCAAC ACGTAGAGCT GACACCACAA AAATTGAAGT CGCCAATAAT
GGTCAAATGA CACAGTTCGA TTTAGATCAA TACATTTTAG ATGGCTCACC AACATCGAAT
CTGCCCCGAG TTTCTGCTGG CACGGTAGTA AGAGTCCATG CATTACCTGA CGATCCATCA
GACAACAAAT CGCAATGGGT AAGCCAGAGC TCTGATGCCT CGATATATGT TTTCGGTCAA
ATCAATGCCC CTGGCCGCTA TCGCTTTACC GAAGAGATGC ACTTTCTGGA TATTTTATCT
GCCGCCGATG GACCAACAAT GGATGCCGAT ATTCACAATA TTCGTGTGAC GCACCGAGGC
CTAGGCTATG CCAAAGTGAG TAAATTGAAT TTGTCGATGT ACTTTGAAAC GGGCGATGAG
TCTATTCTGC CCCACGTTCG TCCCGGCGAT ACCATTTACA TTCCGGAAAA AAACAAAAAC
TGGTTGGATC GCTCCAAAGA ATCCACCGTG CGCGTATTAG GTGAAGTAAG AGACCCAGGG
CGCTATGTAT TTAATGACAA CATGACGGTA CTTGACCTGC TGGCCGAAGC AGGAGGCCCG
ACTAACAATG CGTATCTTGA AAAAATCAGT GTGGTCAACA TGTCTTGCTG TCAGGGCCAA
GCTCGAACAT TTGATTTGGT GAACTTTAGC AAAACCGCCA ACATTTATGA TTTACCAGTC
ATCCGTGCAG GCGACACCAT TTATATTCCA CATAAAGACG AAAGCTTTGC TGAAAAAGCA
AGAGCCGGGT TAAGAGATAT TCTACAAATC ACCACAACCA TCGTGTTAAT AGGAGCGTTG
TAA
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| Protein sequence | MNTMKPFITL VLLCLVAWVP TSSADENNTV KVGDLIQINL PGEASLNKGF QVDRRGRINL
PEVGPVFVAG YNEQQLQDVI IETLKTVYRD VNNARVFIKQ QQLLVSVQGY VVKPGEYTLP
SGSNIQMFVY EAGGLRAGAQ LDKMIVKRGE KNIEFDYKRF LDTGDNSQLP KLESLDVLFV
PASPLVGNIE QEFDAAKLAN SGDSADSARA IKVFGEVNAP GSFSYKPNTT LVDVVMRAGG
VTRYASVEQI RVITNNNPTM FNLKKYLDTG DQSLLPEILP GATIFVPKQE EEIKAGANVV
YVMGEVAHPG AYEGKQDASF MDILANAGGP TRYAESRQIR VIKADGKVIK FDLTAHTEGL
SSVRPPNVGP GDAIFVPEKT DFNEKSWLKV APSRAVAVMG EVVRPGRIEW SDEMDLIDLL
AHVGGPTRRA DTTKIEVANN GQMTQFDLDQ YILDGSPTSN LPRVSAGTVV RVHALPDDPS
DNKSQWVSQS SDASIYVFGQ INAPGRYRFT EEMHFLDILS AADGPTMDAD IHNIRVTHRG
LGYAKVSKLN LSMYFETGDE SILPHVRPGD TIYIPEKNKN WLDRSKESTV RVLGEVRDPG
RYVFNDNMTV LDLLAEAGGP TNNAYLEKIS VVNMSCCQGQ ARTFDLVNFS KTANIYDLPV
IRAGDTIYIP HKDESFAEKA RAGLRDILQI TTTIVLIGAL
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