Gene VEA_003512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003512 
Symbol 
ID8557245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2098994 
End bp2099815 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content45% 
IMG OID646406607 
Productsterol desaturase 
Protein accessionYP_003286137 
Protein GI262394283 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGAAA CGACGTTTCA AGATCCCTCG TGGATAAGAT TAGGCTTTTT TCTCGGCGTA 
TTATTACTTT GTGCCCTTTG GGAAAACAAA CTGCCGAGAA AAACACTTAC CGCTTCACGT
GGGTTTCGCT GGGTCAATAA CTTATCACTG GTTGCTGTGA ATAGCTTGAT TGTTGCGTTA
GTCATGCCTA TCGCCGCCTT TCAAGCTGCA ATTATCGCTC AGGAGCAACA ATGGGGACTA
TTTAATTTGC TCTCGCTGCC CGCTTGGTTA AACGTGCTTC TAGCGGTTAT TCTGCTTGAT
TTCGTCATTT ACGTTCAGCA TGTGGTCTTT CACTATGTAA AGCCACTGTG GAAGCTTCAT
CGAATGCACC ATGCCGATCT CGACATTGAT GTCACTACTG GCGCACGTTT TCACCCCATC
GAAATCATCA TCTCGATGGG TGTCAAAATT GCCACTGTAT TTATCTTAGG CGTTTCTCCT
ATCGCTATCG TGGTATTCGA AATAGTGCTC AATGCCAGTG CGATGTTTAA TCACAGTAAT
GCAAAACTGG CTTTATCAGC GGATCAGAAA CTGCGAAACG TCATAGTGAC GCCAGACATG
CATCGCGTTC ATCATTCCGT GATAGCAAAA GAAACCAACT CGAATTTCGG TTTCTTCCTT
TCTGTTTGGG ACCGACTTTT TGGGACATAT CGAGCTCAGC CTGAACTTGG CCATGATGAT
GTCGTAATTG GTATACCGGA AATTAGGAAT GAAGCAGAAC AACGATTAGA CAAGCTGTTA
ACGCAACCTT TTCGCTATAA CCGAAGAAGA CGCAACAGTT GA
 
Protein sequence
MTETTFQDPS WIRLGFFLGV LLLCALWENK LPRKTLTASR GFRWVNNLSL VAVNSLIVAL 
VMPIAAFQAA IIAQEQQWGL FNLLSLPAWL NVLLAVILLD FVIYVQHVVF HYVKPLWKLH
RMHHADLDID VTTGARFHPI EIIISMGVKI ATVFILGVSP IAIVVFEIVL NASAMFNHSN
AKLALSADQK LRNVIVTPDM HRVHHSVIAK ETNSNFGFFL SVWDRLFGTY RAQPELGHDD
VVIGIPEIRN EAEQRLDKLL TQPFRYNRRR RNS