Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003512 |
Symbol | |
ID | 8557245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2098994 |
End bp | 2099815 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406607 |
Product | sterol desaturase |
Protein accession | YP_003286137 |
Protein GI | 262394283 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGAAA CGACGTTTCA AGATCCCTCG TGGATAAGAT TAGGCTTTTT TCTCGGCGTA TTATTACTTT GTGCCCTTTG GGAAAACAAA CTGCCGAGAA AAACACTTAC CGCTTCACGT GGGTTTCGCT GGGTCAATAA CTTATCACTG GTTGCTGTGA ATAGCTTGAT TGTTGCGTTA GTCATGCCTA TCGCCGCCTT TCAAGCTGCA ATTATCGCTC AGGAGCAACA ATGGGGACTA TTTAATTTGC TCTCGCTGCC CGCTTGGTTA AACGTGCTTC TAGCGGTTAT TCTGCTTGAT TTCGTCATTT ACGTTCAGCA TGTGGTCTTT CACTATGTAA AGCCACTGTG GAAGCTTCAT CGAATGCACC ATGCCGATCT CGACATTGAT GTCACTACTG GCGCACGTTT TCACCCCATC GAAATCATCA TCTCGATGGG TGTCAAAATT GCCACTGTAT TTATCTTAGG CGTTTCTCCT ATCGCTATCG TGGTATTCGA AATAGTGCTC AATGCCAGTG CGATGTTTAA TCACAGTAAT GCAAAACTGG CTTTATCAGC GGATCAGAAA CTGCGAAACG TCATAGTGAC GCCAGACATG CATCGCGTTC ATCATTCCGT GATAGCAAAA GAAACCAACT CGAATTTCGG TTTCTTCCTT TCTGTTTGGG ACCGACTTTT TGGGACATAT CGAGCTCAGC CTGAACTTGG CCATGATGAT GTCGTAATTG GTATACCGGA AATTAGGAAT GAAGCAGAAC AACGATTAGA CAAGCTGTTA ACGCAACCTT TTCGCTATAA CCGAAGAAGA CGCAACAGTT GA
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Protein sequence | MTETTFQDPS WIRLGFFLGV LLLCALWENK LPRKTLTASR GFRWVNNLSL VAVNSLIVAL VMPIAAFQAA IIAQEQQWGL FNLLSLPAWL NVLLAVILLD FVIYVQHVVF HYVKPLWKLH RMHHADLDID VTTGARFHPI EIIISMGVKI ATVFILGVSP IAIVVFEIVL NASAMFNHSN AKLALSADQK LRNVIVTPDM HRVHHSVIAK ETNSNFGFFL SVWDRLFGTY RAQPELGHDD VVIGIPEIRN EAEQRLDKLL TQPFRYNRRR RNS
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