| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003425 |
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| Symbol | |
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| ID | 8557158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2002105 |
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| End bp | 2003541 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406520 |
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| Product | ribosomal RNA small subunit methyltransferase F |
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| Protein accession | YP_003286050 |
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| Protein GI | 262394196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.837447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATCCTA ATGTTTACAT CCCAGACGCG TTTCTGGAAA AAATCCAAAC TATCCTTCCT
GCTCACCTCA ACATGGAAGA CTTTATCGCA TCGTGCCAAA AGCCACTGCG CAAAAGTATT
CGTGTTAATA CGTTGAAGAT CAGTGTTGAA GCGTTTCTAG AACGTGCAGA CGCAAAAGGC
TGGAAGCTTT CTCCTGTGCC TTGGTGTGAC ACAGGTTTTT GGATTGAAGC GGACGAGTCA
GTTGTACCAT TAGGCAACAC TGCAGAGCAC ATGTCAGGCT TATTCTACAT TCAAGAAGCC
AGTTCAATGA TGCCAGTATC TGCGCTGTTT ATGAATGACG AATCTTACGA TGCCGTGTTA
GATACAGCAG CTGCACCAGG ATCAAAGACC ACTCAAATCG CGGCTTTAAT GAACAATGAA
GGCGTTCTCG TGGCTAATGA ATACGCCGCA AGTCGTGTAA AAGTGCTGCA TGCCAACGTG
GAACGTTGTG GTGTACGTAA CGCCGCACTA AGTAACTTCG ATGGGCGCGT TTTTGGCGGT
TGGCTACCAG AACAATTTGA TGCGGTTCTG CTCGACGCGC CCTGCTCCGG CGAAGGCACC
GTTCGCAAAG ACGAAGATGC AATGAAAAAC TGGACGCAAG CTTCCGTGCT CGACATAGCT
GACACACAGA AAGATCTTAT TGAAAGCGCC TTCCATGCAC TAAAGCCCGG TGGTGTGATG
GTTTACTCAA CGTGCACACT CAGTACCGAA GAAAACCAAC AAGTTTGTCA TCACTTGAAA
GAAACCTTTG GTGATGCCGT TGAGTTTGAA AGCCTTGAGA CCTTGTTTGA AAACGCAAAT
GCTGCTCTAA CTGAAGAAGG TTTTTTGCAT ATCTTTCCAC AGGTCTACGA CTGCGAAGGG
TTCTTTGTTG CAAGAATTCG TAAACTGGCT GCTGTTGAAC CACCAAAGGT CAAAAAGCGC
ATGGGCAAGT TCCCGTTTAC CAAAGCATCG AAAAAAGAAT CGGTTGAAAT TGCCCAACAG
CTGCAAAGTG CGTTAGGTAT TGAACTTCCG AATGACAGTT CTATATGGCT TCGCGATAAA
GATGTCTGGT TGTTCCCTAA TTCTTTAGAG CCAATGATCG GCGAATTACG CTTCTCTCGT
ATGGGTATAA AGATCGCGGA AGCCCATAAA AATGGCTACC GTTGGCAGCA TCAGGTGGCG
ACGGCCTTAG CGACGGGCTC TGAGGCAAAC GCCATCGAGC TAACCATTGA AGAAGCGCGC
GAATGGTACA TGGGACGTGA TGTTCGCCCA CAAACGATTC CTGATGGAAT GAAAACAGGT
AAAGGCGAAG TGCTTGTCAC CTATCAAGGC GCAGTCATTG GCCTTGGAAA ATGGGTAAGC
AACAGAATTA AGAACGGTCT TCCTCGCGAA TTAGTACGAG ATAAGAACTT ATTTTAA
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| Protein sequence | MHPNVYIPDA FLEKIQTILP AHLNMEDFIA SCQKPLRKSI RVNTLKISVE AFLERADAKG
WKLSPVPWCD TGFWIEADES VVPLGNTAEH MSGLFYIQEA SSMMPVSALF MNDESYDAVL
DTAAAPGSKT TQIAALMNNE GVLVANEYAA SRVKVLHANV ERCGVRNAAL SNFDGRVFGG
WLPEQFDAVL LDAPCSGEGT VRKDEDAMKN WTQASVLDIA DTQKDLIESA FHALKPGGVM
VYSTCTLSTE ENQQVCHHLK ETFGDAVEFE SLETLFENAN AALTEEGFLH IFPQVYDCEG
FFVARIRKLA AVEPPKVKKR MGKFPFTKAS KKESVEIAQQ LQSALGIELP NDSSIWLRDK
DVWLFPNSLE PMIGELRFSR MGIKIAEAHK NGYRWQHQVA TALATGSEAN AIELTIEEAR
EWYMGRDVRP QTIPDGMKTG KGEVLVTYQG AVIGLGKWVS NRIKNGLPRE LVRDKNLF
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